SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5fbga_ (5fbg A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2009738Fold a.124: Phospholipase C/P1 nuclease [48536] (1 superfamily)
  4. 2009739Superfamily a.124.1: Phospholipase C/P1 nuclease [48537] (3 families) (S)
    duplication: all chain but the N-terminal helix forms two structural repeats
  5. 2009774Family a.124.1.0: automated matches [194368] (1 protein)
    not a true family
  6. 2009775Protein automated matches [194369] (3 species)
    not a true protein
  7. 2284280Species Aspergillus oryzae [TaxId:510516] [327581] (7 PDB entries)
  8. 2284281Domain d5fbga_: 5fbg A: [327582]
    automated match to d1ak0a_
    complexed with dcz, gng, nag, po4, zn; mutant

Details for d5fbga_

PDB Entry: 5fbg (more details), 1.97 Å

PDB Description: s1 nuclease from aspergillus oryzae, mutant d65n, in complex with phosphate, 2'-deoxycytidine and 2'-deoxyguanosine.
PDB Compounds: (A:) Nuclease S1

SCOPe Domain Sequences for d5fbga_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5fbga_ a.124.1.0 (A:) automated matches {Aspergillus oryzae [TaxId: 510516]}

SCOPe Domain Coordinates for d5fbga_:

Click to download the PDB-style file with coordinates for d5fbga_.
(The format of our PDB-style files is described here.)

Timeline for d5fbga_:

  • d5fbga_ appears in periodic updates to SCOPe 2.06 starting on 2016-12-28