SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Aspergillus oryzae [TaxId: 510516]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2009738Fold a.124: Phospholipase C/P1 nuclease [48536] (1 superfamily)
    multihelical
  4. 2009739Superfamily a.124.1: Phospholipase C/P1 nuclease [48537] (3 families) (S)
    duplication: all chain but the N-terminal helix forms two structural repeats
  5. 2009774Family a.124.1.0: automated matches [194368] (1 protein)
    not a true family
  6. 2009775Protein automated matches [194369] (3 species)
    not a true protein
  7. 2284280Species Aspergillus oryzae [TaxId:510516] [327581] (7 PDB entries)

PDB entries in Species: Aspergillus oryzae [TaxId: 510516]:

  1. Domain(s) for 5fb9:
    1. 2284286Domain d5fb9a_: 5fb9 A: [327587]
      automated match to d1ak0a_
      complexed with btb, na, nag, zn
    2. 2284306Domain d5fb9b_: 5fb9 B: [327607]
      automated match to d1ak0a_
      complexed with btb, na, nag, zn
  2. Domain(s) for 5fba:
  3. Domain(s) for 5fbb:
    1. 2284303Domain d5fbbb_: 5fbb B: [327604]
      automated match to d1ak0a_
      complexed with amp, btb, ca, ete, na, nag, po4, zn
    2. 2284344Domain d5fbba_: 5fbb A: [327645]
      automated match to d1ak0a_
      complexed with amp, btb, ca, ete, na, nag, po4, zn
  4. Domain(s) for 5fbc:
  5. Domain(s) for 5fbd:
  6. Domain(s) for 5fbf:
  7. Domain(s) for 5fbg:
    1. 2284281Domain d5fbga_: 5fbg A: [327582]
      automated match to d1ak0a_
      complexed with dcz, gng, nag, po4, zn; mutant
    2. 2284304Domain d5fbgb_: 5fbg B: [327605]
      automated match to d1ak0a_
      complexed with dcz, gng, nag, po4, zn; mutant

More info for Species Aspergillus oryzae [TaxId:510516] from a.124.1.0 automated matches

Timeline for Species Aspergillus oryzae [TaxId:510516] from a.124.1.0 automated matches:

  • Species Aspergillus oryzae [TaxId:510516] from a.124.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-12-28