SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5ttfd_ (5ttf D:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2072411Fold b.85: beta-clip [51268] (7 superfamilies)
    double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
  4. 2073020Superfamily b.85.7: SET domain [82199] (4 families) (S)
    duplication: the core is composed of two structural repeats similar to (circularly permuted) repeats of AFPIII
    also contains a substrate-binding alpha+beta subdomain inserted in the core
  5. 2073097Family b.85.7.0: automated matches [227191] (1 protein)
    not a true family
  6. 2073098Protein automated matches [226914] (1 species)
    not a true protein
  7. 2073099Species Human (Homo sapiens) [TaxId:9606] [225158] (21 PDB entries)
  8. 2284200Domain d5ttfd_: 5ttf D: [327501]
    automated match to d3k5ka_
    complexed with 7kz, cl, sam, unx, zn

Details for d5ttfd_

PDB Entry: 5ttf (more details), 1.72 Å

PDB Description: crystal structure of catalytic domain of g9a with ms012
PDB Compounds: (D:) Histone-lysine N-methyltransferase EHMT2

SCOPe Domain Sequences for d5ttfd_:

Sequence, based on SEQRES records: (download)

>d5ttfd_ b.85.7.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
tekiicrdvargyenvpipcvngvdgepcpedykyisencetstmnidrnithlqhctcv
ddcsssnclcgqlsircwydkdgrllqefnkiepplifecnqacscwrncknrvvqsgik
vrlqlyrtakmgwgvralqtipqgtficeyvgelisdaeadvreddsylfdldnkdgevy
cidaryygnisrfinhlcdpniipvrvfmlhqdlrfpriaffssrdirtgeelgfdygdr
fwdikskyftcqcgsekckhsaeai

Sequence, based on observed residues (ATOM records): (download)

>d5ttfd_ b.85.7.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
tekiicrdvargyenvpipcvngvdgepcpedykyisencetstmnidrnithlqhctcv
ddcsssnclcgqlsircwydkdgrllqefnkiepplifecnqacscwrncknrvvqsgik
vrlqlyrtakmgwgvralqtipqgtficeyvgelisdaeadvreddsylfdldevycida
ryygnisrfinhlcdpniipvrvfmlhqdlrfpriaffssrdirtgeelgfdygdrfwdi
kskyftcqcgsekckhsaeai

SCOPe Domain Coordinates for d5ttfd_:

Click to download the PDB-style file with coordinates for d5ttfd_.
(The format of our PDB-style files is described here.)

Timeline for d5ttfd_:

  • d5ttfd_ appears in periodic updates to SCOPe 2.06 starting on 2016-12-22