SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5ltpd2 (5ltp D:220-225)

  1. Root: SCOPe 2.06
  2. 2245868Class l: Artifacts [310555] (1 fold)
  3. 2245869Fold l.1: Tags [310573] (1 superfamily)
  4. 2245870Superfamily l.1.1: Tags [310607] (1 family) (S)
  5. 2245871Family l.1.1.1: Tags [310682] (2 protein domains)
  6. 2245872Protein C-terminal Tags [310895] (1 species)
  7. 2245873Species Synthetic [311502] (4228 PDB entries)
  8. 2284176Domain d5ltpd2: 5ltp D:220-225 [327477]
    Other proteins in same PDB: d5ltpa_, d5ltpb1, d5ltpc1, d5ltpd1, d5ltpe1, d5ltpf1
    complexed with cl, flc

Details for d5ltpd2

PDB Entry: 5ltp (more details), 1.7 Å

PDB Description: structure of the yellow-green fluorescent protein mneongreen from branchiostoma lanceolatum at the acidic ph 4.5
PDB Compounds: (D:) mNeonGreen

SCOPe Domain Sequences for d5ltpd2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ltpd2 l.1.1.1 (D:220-225) C-terminal Tags {Synthetic}
gmdely

SCOPe Domain Coordinates for d5ltpd2:

Click to download the PDB-style file with coordinates for d5ltpd2.
(The format of our PDB-style files is described here.)

Timeline for d5ltpd2:

  • d5ltpd2 appears in periodic updates to SCOPe 2.06 starting on 2016-12-22