SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Staphylococcus aureus [TaxId: 1280]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2180205Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. 2180489Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families) (S)
  5. 2180721Family d.79.2.0: automated matches [227141] (1 protein)
    not a true family
  6. 2180722Protein automated matches [226843] (8 species)
    not a true protein
  7. 2284171Species Staphylococcus aureus [TaxId:1280] [327472] (2 PDB entries)

PDB entries in Species: Staphylococcus aureus [TaxId: 1280]:

  1. Domain(s) for 5mn4:
  2. Domain(s) for 5mn5:
    1. 2284172Domain d5mn5a2: 5mn5 A:209-315 [327473]
      Other proteins in same PDB: d5mn5a1, d5mn5b1
      automated match to d4dxda2
      complexed with gtp
    2. 2284193Domain d5mn5b2: 5mn5 B:209-315 [327494]
      Other proteins in same PDB: d5mn5a1, d5mn5b1
      automated match to d4dxda2
      complexed with gtp

More info for Species Staphylococcus aureus [TaxId:1280] from d.79.2.0 automated matches

Timeline for Species Staphylococcus aureus [TaxId:1280] from d.79.2.0 automated matches:

  • Species Staphylococcus aureus [TaxId:1280] from d.79.2.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-12-22