SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5li8a_ (5li8 A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2004931Fold a.104: Cytochrome P450 [48263] (1 superfamily)
    multihelical
  4. 2004932Superfamily a.104.1: Cytochrome P450 [48264] (2 families) (S)
  5. 2005528Family a.104.1.0: automated matches [191509] (1 protein)
    not a true family
  6. 2005529Protein automated matches [190847] (58 species)
    not a true protein
  7. 2284134Species Mycobacterium tuberculosis [TaxId:83331] [327435] (3 PDB entries)
  8. 2284140Domain d5li8a_: 5li8 A: [327441]
    automated match to d4apya_
    complexed with hem, kkk

Details for d5li8a_

PDB Entry: 5li8 (more details), 1.83 Å

PDB Description: crystal structure of mycobacterium tuberculosis cyp126a1 in complex with ketoconazole
PDB Compounds: (A:) Putative cytochrome P450 126

SCOPe Domain Sequences for d5li8a_:

Sequence, based on SEQRES records: (download)

>d5li8a_ a.104.1.0 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 83331]}
glsgidltdldnfadgfphhlfaihrreapvywhrptehtpdgegfwsvatyaetlevlr
dpvtyssvtggqrrfggtvlqdlpvagqvlnmmddprhtrirrlvssgltprmirrvedd
lrrrarglldgvepgapfdfvveiaaelpmqmicillgvpetdrhwlfeavepgfdfrgs
rratmprlnvedagsrlytyaleliagkraepaddmlsvvanatiddpdapalsdaelyl
ffhllfsagaettrnsiaggllalaenpdqlqtlrsdfellptaieeivrwtspspskrr
tasravslggqpieagqkvvvwegsanrdpsvfdradefditrkpnphlgfgqgvhyclg
anlarlelrvlfeellsrfgsvrvvepaewtrsnrhtgirhlvvelrgg

Sequence, based on observed residues (ATOM records): (download)

>d5li8a_ a.104.1.0 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 83331]}
glsgidltdldnfadgfphhlfaihrreapvywhrptehtpdgegfwsvatyaetlevlr
dpvtyssvtfggtvlqdlpvagqvlnmmddprhtrirrlvssgltprmirrveddlrrra
rglldgvepgapfdfvveiaaelpmqmicillgvpetdrhwlfeaveplnvedagsrlyt
yaleliagkraepaddmlsvvanatiddpdapalsdaelylffhllfsagaettrnsiag
gllalaenpdqlqtlrsdfellptaieeivrwtspspskrrtasravslggqpieagqkv
vvwegsanrdpsvfdradefditrkpnphlgfgqgvhyclganlarlelrvlfeellsrf
gsvrvvepaewtrsnrhtgirhlvvelrgg

SCOPe Domain Coordinates for d5li8a_:

Click to download the PDB-style file with coordinates for d5li8a_.
(The format of our PDB-style files is described here.)

Timeline for d5li8a_:

  • d5li8a_ appears in periodic updates to SCOPe 2.06 starting on 2016-12-22