SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5js3e_ (5js3 E:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2183652Fold d.92: Zincin-like [55485] (2 superfamilies)
    contains mixed beta sheet with connection over free side of the sheet
  4. 2183653Superfamily d.92.1: Metalloproteases ("zincins"), catalytic domain [55486] (18 families) (S)
  5. 2183667Family d.92.1.2: Thermolysin-like [55490] (5 protein domains)
    includes alpha-helical C-terminal domain characteristic for the family
  6. 2183681Protein Thermolysin [63414] (3 species)
  7. 2183682Species Bacillus thermoproteolyticus [TaxId:1427] [55494] (149 PDB entries)
    Uniprot P00800
  8. 2284101Domain d5js3e_: 5js3 E: [327402]
    automated match to d1kkka_
    complexed with 6mg, ca, dms, gol, zn

Details for d5js3e_

PDB Entry: 5js3 (more details), 1.16 Å

PDB Description: thermolysin in complex with jc114.
PDB Compounds: (E:) thermolysin

SCOPe Domain Sequences for d5js3e_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5js3e_ d.92.1.2 (E:) Thermolysin {Bacillus thermoproteolyticus [TaxId: 1427]}

SCOPe Domain Coordinates for d5js3e_:

Click to download the PDB-style file with coordinates for d5js3e_.
(The format of our PDB-style files is described here.)

Timeline for d5js3e_:

  • d5js3e_ appears in periodic updates to SCOPe 2.06 starting on 2016-12-22