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Lineage for d5k9kb2 (5k9k B:107-214)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2024392Protein automated matches [190374] (13 species)
    not a true protein
  7. 2024406Species Human (Homo sapiens) [TaxId:9606] [187221] (595 PDB entries)
  8. 2284081Domain d5k9kb2: 5k9k B:107-214 [327382]
    Other proteins in same PDB: d5k9kb1, d5k9kf1, d5k9kf2, d5k9ki1, d5k9ki2, d5k9kl1
    automated match to d1dn0a2
    complexed with bma, man, nag

Details for d5k9kb2

PDB Entry: 5k9k (more details), 2.97 Å

PDB Description: crystal structure of multidonor hv6-1-class broadly neutralizing influenza a antibody 56.a.09 in complex with hemagglutinin hong kong 1968.
PDB Compounds: (B:) 56.a.09 light chain

SCOPe Domain Sequences for d5k9kb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5k9kb2 b.1.1.2 (B:107-214) automated matches {Human (Homo sapiens) [TaxId: 9606]}
krtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteq
dskdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

SCOPe Domain Coordinates for d5k9kb2:

Click to download the PDB-style file with coordinates for d5k9kb2.
(The format of our PDB-style files is described here.)

Timeline for d5k9kb2:

  • d5k9kb2 appears in periodic updates to SCOPe 2.06 starting on 2016-12-22