Lineage for d5f9sb_ (5f9s B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2130990Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2130991Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2131439Family c.67.1.3: Cystathionine synthase-like [53402] (17 protein domains)
  6. 2131631Protein automated matches [190399] (9 species)
    not a true protein
  7. 2131644Species Human (Homo sapiens) [TaxId:9606] [189951] (11 PDB entries)
  8. 2284025Domain d5f9sb_: 5f9s B: [327326]
    automated match to d4kyoc_
    complexed with plp

Details for d5f9sb_

PDB Entry: 5f9s (more details), 1.7 Å

PDB Description: crystal structure of human alanine:glyoxylate aminotransferase major allele (agt-ma) at 1.7 angstrom; internal aldimine with plp in the active site
PDB Compounds: (B:) Serine--pyruvate aminotransferase

SCOPe Domain Sequences for d5f9sb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5f9sb_ c.67.1.3 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
llvtppkallkplsipnqlllgpgpsnlpprimaagglqmigsmskdmyqimdeikegiq
yvfqtrnpltlvisgsghcaleaalvnvlepgdsflvgangiwgqravdigerigarvhp
mtkdpgghytlqeveeglaqhkpvllflthgesstgvlqpldgfgelchrykclllvdsv
aslggtplymdrqgidilysgsqkalnappgtslisfsdkakkkmysrktkpfsfyldik
wlanfwgcddqprmyhhtipvislyslreslaliaeqglenswrqhreaaaylhgrlqal
glqlfvkdpalrlptvttvavpagydwrdivsyvidhfdieimgglgpstgkvlrigllg
cnatrenvdrvtealraalqhcpkkk

SCOPe Domain Coordinates for d5f9sb_:

Click to download the PDB-style file with coordinates for d5f9sb_.
(The format of our PDB-style files is described here.)

Timeline for d5f9sb_:

  • d5f9sb_ appears in periodic updates to SCOPe 2.06 starting on 2016-12-22