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Lineage for d5m4rd_ (5m4r D:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2012284Fold a.135: Tetraspanin [48651] (1 superfamily)
    5 helices: irregular disulfide-linked array; form homodimer
  4. 2012285Superfamily a.135.1: Tetraspanin [48652] (1 family) (S)
  5. 2012286Family a.135.1.1: Tetraspanin [48653] (2 protein domains)
  6. 2012293Protein automated matches [256548] (3 species)
    not a true protein
  7. 2012296Species Human (Homo sapiens) [TaxId:9606] [256549] (11 PDB entries)
  8. 2283942Domain d5m4rd_: 5m4r D: [327243]
    Other proteins in same PDB: d5m4re2
    automated match to d1g8qa_
    complexed with edo, so4

Details for d5m4rd_

PDB Entry: 5m4r (more details), 3.1 Å

PDB Description: structural tuning of cd81lel (space group c2)
PDB Compounds: (D:) CD81 antigen

SCOPe Domain Sequences for d5m4rd_:

Sequence, based on SEQRES records: (download)

>d5m4rd_ a.135.1.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vnkdqiakdvkqfydqalqqavvdddannakavvktfhetldccgsstltalttsvlknn
lcpsgsniisnlfkedchqkiddlfsgk

Sequence, based on observed residues (ATOM records): (download)

>d5m4rd_ a.135.1.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vnkdqiakdvkqfydqalqqavvddnnakavvktfhetldccgsstltalttsvlknnlc
psgsniisnlfkedchqkiddlfsgk

SCOPe Domain Coordinates for d5m4rd_:

Click to download the PDB-style file with coordinates for d5m4rd_.
(The format of our PDB-style files is described here.)

Timeline for d5m4rd_:

  • d5m4rd_ appears in periodic updates to SCOPe 2.06 starting on 2016-12-15