SCOPe 2.08: Domain d5j26a1: 5j26 A:1487-1537

Lineage for d5j26a1 (5j26 A:1487-1537)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.9: Tudor/PWWP/MBT [63748] (5 families)

5. Family b.34.9.1: Tudor domain [63749] (9 proteins)
   Pfam PF00567

6. Protein p53-binding protein 1, 53BP1, N-terminal domain [418914] (1 species)
   protein duplication: contains two Tudor domains in tandem

7. Species Human (Homo sapiens) [TaxId:9606] [419338] (18 PDB entries)
   Uniprot Q12888 1485-1602 ! Uniprot Q12888 1484-1606

8. Domain d5j26a1: 5j26 A:1487-1537 [327156]
   Other proteins in same PDB: d5j26a2, d5j26b_
   automated match to d2lvma1

Details for d5j26a1

PDB Entry: 5j26, 2.5 Å

PDB Description: crystal structure of a 53bp1 tudor domain in complex with a ubiquitin variant

PDB Compounds: (A:) tumor suppressor p53-binding protein 1

SCOPe Domain Sequences for d5j26a1:

Sequence, based on SEQRES records:

>d5j26a1 b.34.9.1 (A:1487-1537) p53-binding protein 1, 53BP1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
vglrvvakwssngyfysgkitrdvgagkykllfddgyecdvlgkdillcdp

Sequence, based on observed residues (ATOM records):

>d5j26a1 b.34.9.1 (A:1487-1537) p53-binding protein 1, 53BP1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
vglrvvakwssngyfysgkitrdvkykllfddgyecdvlgkdillcdp

Timeline for d5j26a1:

• d5j26a1 first appeared in SCOPe 2.06
  
• d5j26a1 appears in SCOPe 2.07