SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Zika virus [TaxId: 64320]

  1. Root: SCOPe 2.06
  2. 2229111Class g: Small proteins [56992] (94 folds)
  3. 2237459Fold g.96: Flavivirus non-structural protein NS2B-like [310561] (1 superfamily)
  4. 2237460Superfamily g.96.1: Flavivirus non-structural protein NS2B-like [310588] (2 families) (S)
    Pfam PF01002; see PubMed 16532006 for discussion of NS2B-NS3pro complex
  5. 2281084Family g.96.1.0: automated matches [324385] (1 protein)
    not a true family
  6. 2281085Protein automated matches [324386] (2 species)
    not a true protein
  7. 2283836Species Zika virus [TaxId:64320] [327137] (3 PDB entries)

PDB entries in Species: Zika virus [TaxId: 64320]:

  1. Domain(s) for 5gpi:
    1. 2283837Domain d5gpic_: 5gpi C: [327138]
      Other proteins in same PDB: d5gpib_, d5gpid_, d5gpif_, d5gpih_
      automated match to d2ggva_
    2. 2283850Domain d5gpie_: 5gpi E: [327151]
      Other proteins in same PDB: d5gpib_, d5gpid_, d5gpif_, d5gpih_
      automated match to d2ggva_
    3. 2283851Domain d5gpig_: 5gpi G: [327152]
      Other proteins in same PDB: d5gpib_, d5gpid_, d5gpif_, d5gpih_
      automated match to d2ggva_
    4. 2283852Domain d5gpia_: 5gpi A: [327153]
      Other proteins in same PDB: d5gpib_, d5gpid_, d5gpif_, d5gpih_
      automated match to d2ggva_
  2. Domain(s) for 5h4i:
  3. Domain(s) for 5h6v:

More info for Species Zika virus [TaxId:64320] from g.96.1.0 automated matches

Timeline for Species Zika virus [TaxId:64320] from g.96.1.0 automated matches:

  • Species Zika virus [TaxId:64320] from g.96.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-12-15