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Lineage for d5mere1 (5mer E:1-99)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2020525Protein beta2-microglobulin [88600] (5 species)
  7. 2020537Species Human (Homo sapiens) [TaxId:9606] [88602] (416 PDB entries)
    Uniprot P61769 21-119 ! Uniprot P01884
  8. 2283712Domain d5mere1: 5mer E:1-99 [327013]
    Other proteins in same PDB: d5mera1, d5mera2, d5merb2, d5merd1, d5merd2, d5mere2
    automated match to d1duzb_
    complexed with ca, edo, gol, mes, so4

Details for d5mere1

PDB Entry: 5mer (more details), 1.88 Å

PDB Description: human leukocyte antigen a02 presenting ilakflhel
PDB Compounds: (E:) Beta-2-microglobulin

SCOPe Domain Sequences for d5mere1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5mere1 b.1.1.2 (E:1-99) beta2-microglobulin {Human (Homo sapiens) [TaxId: 9606]}
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

SCOPe Domain Coordinates for d5mere1:

Click to download the PDB-style file with coordinates for d5mere1.
(The format of our PDB-style files is described here.)

Timeline for d5mere1:

  • d5mere1 appears in periodic updates to SCOPe 2.06 starting on 2016-12-08