SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5dcgb1 (5dcg B:2-76)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2116932Fold c.47: Thioredoxin fold [52832] (2 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest
  4. 2116933Superfamily c.47.1: Thioredoxin-like [52833] (24 families) (S)
  5. 2117361Family c.47.1.5: Glutathione S-transferase (GST), N-terminal domain [52862] (19 protein domains)
  6. 2117676Protein Class pi GST [81358] (4 species)
  7. 2117677Species Human (Homo sapiens) [TaxId:9606] [52864] (58 PDB entries)
  8. 2283666Domain d5dcgb1: 5dcg B:2-76 [326967]
    Other proteins in same PDB: d5dcga2, d5dcgb2
    automated match to d13gsa2
    complexed with ca, mes, po4

Details for d5dcgb1

PDB Entry: 5dcg (more details), 2.01 Å

PDB Description: crystal structure of wt apo human glutathione transferase pi
PDB Compounds: (B:) Glutathione S-transferase P

SCOPe Domain Sequences for d5dcgb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5dcgb1 c.47.1.5 (B:2-76) Class pi GST {Human (Homo sapiens) [TaxId: 9606]}
pytvvyfpvrgrcaalrmlladqgqswkeevvtvetwqegslkasclygqlpkfqdgdlt
lyqsntilrhlgrtl

SCOPe Domain Coordinates for d5dcgb1:

Click to download the PDB-style file with coordinates for d5dcgb1.
(The format of our PDB-style files is described here.)

Timeline for d5dcgb1:

  • d5dcgb1 appears in periodic updates to SCOPe 2.06 starting on 2016-12-08

View in 3D
Domains from same chain:
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d5dcgb2