SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Thermococcus kodakarensis [TaxId: 69014]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2138632Fold c.77: Isocitrate/Isopropylmalate dehydrogenase-like [53658] (1 superfamily)
    consists of two intertwined (sub)domains related by pseudo dyad; duplication
    3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest
  4. 2138633Superfamily c.77.1: Isocitrate/Isopropylmalate dehydrogenase-like [53659] (6 families) (S)
    the constituent families form similar dimers
  5. 2138965Family c.77.1.0: automated matches [191423] (1 protein)
    not a true family
  6. 2138966Protein automated matches [190603] (16 species)
    not a true protein
  7. 2283636Species Thermococcus kodakarensis [TaxId:69014] [326937] (4 PDB entries)

PDB entries in Species: Thermococcus kodakarensis [TaxId: 69014]:

  1. Domain(s) for 5hn3:
  2. Domain(s) for 5hn4:
  3. Domain(s) for 5hn5:
  4. Domain(s) for 5hn6:

More info for Species Thermococcus kodakarensis [TaxId:69014] from c.77.1.0 automated matches

Timeline for Species Thermococcus kodakarensis [TaxId:69014] from c.77.1.0 automated matches:

  • Species Thermococcus kodakarensis [TaxId:69014] from c.77.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-12-08