Lineage for d5tmca1 (5tmc A:1-49,A:173-231)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2524493Fold d.74: DCoH-like [55247] (5 superfamilies)
    beta(2)-alpha-beta(2)-alpha; 2 layers, alpha/beta
  4. 2524624Superfamily d.74.3: RBP11-like subunits of RNA polymerase [55257] (3 families) (S)
    form homo and heterodimers
  5. 2524625Family d.74.3.1: RNA polymerase alpha subunit dimerisation domain [55258] (3 protein domains)
  6. 2524626Protein RNA polymerase alpha [55259] (3 species)
  7. 2524641Species Thermus thermophilus [TaxId:274] [75478] (15 PDB entries)
    Uniprot Q9Z9H6; part of multichain biological unit
  8. 2524686Domain d5tmca1: 5tmc A:1-49,A:173-231 [326504]
    Other proteins in same PDB: d5tmca2, d5tmcb2, d5tmcc_, d5tmcd_, d5tmce_, d5tmcf1, d5tmcf2, d5tmcf3
    automated match to d1smya1
    complexed with g4p, mg, po4, zn

Details for d5tmca1

PDB Entry: 5tmc (more details), 2.71 Å

PDB Description: re-refinement of thermus thermopiles dna-directed rna polymerase structure
PDB Compounds: (A:) DNA-directed RNA polymerase subunit alpha

SCOPe Domain Sequences for d5tmca1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5tmca1 d.74.3.1 (A:1-49,A:173-231) RNA polymerase alpha {Thermus thermophilus [TaxId: 274]}
mldsklkapvftvrtqgreygefvleplergfgvtlgnplrrillssipXpvrrvafqve
dtrlgqrtdldkltlriwtdgsvtplealnqaveilrehltyfsnpqaa

SCOPe Domain Coordinates for d5tmca1:

Click to download the PDB-style file with coordinates for d5tmca1.
(The format of our PDB-style files is described here.)

Timeline for d5tmca1: