SCOPe 2.06: Domain d5tvgb1: 5tvg B:1-464

Lineage for d5tvgb1 (5tvg B:1-464)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families)

5. Family c.87.1.0: automated matches [191559] (1 protein)
   not a true family

6. Protein automated matches [190965] (26 species)
   not a true protein

7. Species Burkholderia vietnamiensis [TaxId:269482] [326316] (1 PDB entry)

8. Domain d5tvgb1: 5tvg B:1-464 [326360]
   Other proteins in same PDB: d5tvga2, d5tvgb2, d5tvgd2
   automated match to d5hxaa_
   complexed with gol, mg, udp

Details for d5tvgb1

PDB Entry: 5tvg, 2.3 Å

PDB Description: crystal structure of an alpha,alpha-trehalose-phosphate synthase (udp- forming) from burkholderia vietnamiensis

PDB Compounds: (B:) Alpha,alpha-trehalose-phosphate synthase (UDP-forming)

SCOPe Domain Sequences for d5tvgb1:

Sequence, based on SEQRES records:

>d5tvgb1 c.87.1.0 (B:1-464) automated matches {Burkholderia vietnamiensis [TaxId: 269482]}
msrlivvsnrvaagedtrpsagglavgvmdalkqtggvwfgwngeivgtpdaapavrrdg
nvtyatlgltrrdydqyyrgfsnatlwpvfhyrsdlarfdrqeyagylrvnamlarqlaa
llrpddliwvhdyhllpfahclrelgvknpigfflhipfpspdmlrvvpphdelvkfmca
ydiagfqtdadkrafsdyierrgigtasddgmlhahgrvvkvaaypigvypdaiaeaavq
yggrkpvkmlrdalggrklvmsvdrldyskglverfqsfermlagapdwqgrvsfvqiap
ptrsdvqtyqriretlereagringrfaqldwtpiqylnrkyernllmaffrmsqvgyvt
plrdgmnlvakeyvasqdpadpgvlvlsefagaaaelggallvnpydhaqmadalarala
mplaerqarheenlaqlrnndlsvwrdtfvadlrsvaaaasvtq

Sequence, based on observed residues (ATOM records):

>d5tvgb1 c.87.1.0 (B:1-464) automated matches {Burkholderia vietnamiensis [TaxId: 269482]}
msrlivvsnrvagglavgvmdalkqtggvwfgwngeivgtpdaapavrrdgnvtyatlgl
trrdydqyyrgfsnatlwpvfhyrsdlarfdrqeyagylrvnamlarqlaallrpddliw
vhdyhllpfahclrelgvknpigfflhipfpspdmlrvvpphdelvkfmcaydiagfqtd
adkrafsdyierrgigtasgmlhahgrvvkvaaypigvypdaiaeaavqyggrkpvkmlr
dalggrklvmsvdrldyskglverfqsfermlagapdwqgrvsfvqiapptrsdvqtyqr
iretlereagringrfaqldwtpiqylnrkyernllmaffrmsqvgyvtplrdgmnlvak
eyvasqdpadpgvlvlsefagaaaelggallvnpydhaqmadalaralamplaerqarhe
enlaqlrnndlsvwrdtfvadlrsvaaaasvtq

Timeline for d5tvgb1:

• d5tvgb1 is new in SCOPe 2.06-stable
  
• d5tvgb1 appears in SCOPe 2.07
  
• d5tvgb1 appears in the current release, SCOPe 2.08