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Lineage for d5fjra2 (5fjr A:126-368)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2086988Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 2087095Family c.1.11.2: D-glucarate dehydratase-like [51609] (15 protein domains)
  6. 2087289Protein automated matches [226997] (13 species)
    not a true protein
  7. 2282906Species Amycolatopsis sp. [TaxId:37632] [326207] (5 PDB entries)
  8. 2282974Domain d5fjra2: 5fjr A:126-368 [326275]
    Other proteins in same PDB: d5fjra1, d5fjrb1, d5fjrc1, d5fjrd1
    automated match to d1sjdb1
    complexed with mg, npq; mutant

Details for d5fjra2

PDB Entry: 5fjr (more details), 2.44 Å

PDB Description: n-acyl amino acid racemase from amycolatopsis sp. ts-1-60: q26a m50i g291d f323y mutant in complex with n-acetyl napthylalanine
PDB Compounds: (A:) o-succinylbenzoate synthase

SCOPe Domain Sequences for d5fjra2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5fjra2 c.1.11.2 (A:126-368) automated matches {Amycolatopsis sp. [TaxId: 37632]}
vrdsvpcgvsvgimdtipqlldvvggyldegyvriklkiepgwdvepvravrerfgddvl
lqvdantaytlgdapqlarldpfglllieqpleeedvlghaelarriqtpicldesivsa
raaadaiklgavqivnikpgrvggylearrvhdvcaahgipvwcgdmietglgraanval
aslpnftlpgdtsasdryyktditepfvlsgghlpvptgpglgvapipelldevttakvw
igs

SCOPe Domain Coordinates for d5fjra2:

Click to download the PDB-style file with coordinates for d5fjra2.
(The format of our PDB-style files is described here.)

Timeline for d5fjra2:

  • d5fjra2 appears in periodic updates to SCOPe 2.06 starting on 2016-11-17