SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2014191Fold a.175: Orange carotenoid protein, N-terminal domain [81929] (1 superfamily)
    multihelical; array
  4. 2014192Superfamily a.175.1: Orange carotenoid protein, N-terminal domain [81930] (2 families) (S)
    duplication: contains four structural repeats arranged into two intertwined 4-helical subdomains
    automatically mapped to Pfam PF09150
  5. 2282929Family a.175.1.0: automated matches [326230] (1 protein)
    not a true family
  6. 2282930Protein automated matches [326231] (1 species)
    not a true protein

Species:

More info for Protein automated matches from a.175.1.0: automated matches

Timeline for Protein automated matches from a.175.1.0: automated matches:

  • Protein automated matches from a.175.1.0: automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-11-16