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Lineage for Species: Amycolatopsis sp. [TaxId: 37632]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2086988Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 2087095Family c.1.11.2: D-glucarate dehydratase-like [51609] (15 protein domains)
  6. 2087289Protein automated matches [226997] (13 species)
    not a true protein
  7. 2282906Species Amycolatopsis sp. [TaxId:37632] [326207] (5 PDB entries)

PDB entries in Species: Amycolatopsis sp. [TaxId: 37632]:

  1. Domain(s) for 5fjo:
    1. 2282914Domain d5fjoa2: 5fjo A:126-367 [326215]
      Other proteins in same PDB: d5fjoa1, d5fjob1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
    2. 2282997Domain d5fjob2: 5fjo B:126-368 [326298]
      Other proteins in same PDB: d5fjoa1, d5fjob1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
  2. Domain(s) for 5fjp:
    1. 2282907Domain d5fjpc2: 5fjp C:126-367 [326208]
      Other proteins in same PDB: d5fjpa1, d5fjpb1, d5fjpc1, d5fjpd1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
    2. 2282925Domain d5fjpb2: 5fjp B:126-368 [326226]
      Other proteins in same PDB: d5fjpa1, d5fjpb1, d5fjpc1, d5fjpd1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
    3. 2282936Domain d5fjpa2: 5fjp A:126-368 [326237]
      Other proteins in same PDB: d5fjpa1, d5fjpb1, d5fjpc1, d5fjpd1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
    4. 2282940Domain d5fjpd2: 5fjp D:126-367 [326241]
      Other proteins in same PDB: d5fjpa1, d5fjpb1, d5fjpc1, d5fjpd1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
  3. Domain(s) for 5fjr:
    1. 2282911Domain d5fjrc2: 5fjr C:126-367 [326212]
      Other proteins in same PDB: d5fjra1, d5fjrb1, d5fjrc1, d5fjrd1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
    2. 2282923Domain d5fjrb2: 5fjr B:126-367 [326224]
      Other proteins in same PDB: d5fjra1, d5fjrb1, d5fjrc1, d5fjrd1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
    3. 2282952Domain d5fjrd2: 5fjr D:126-367 [326253]
      Other proteins in same PDB: d5fjra1, d5fjrb1, d5fjrc1, d5fjrd1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
    4. 2282974Domain d5fjra2: 5fjr A:126-368 [326275]
      Other proteins in same PDB: d5fjra1, d5fjrb1, d5fjrc1, d5fjrd1
      automated match to d1sjdb1
      complexed with mg, npq; mutant
  4. Domain(s) for 5fjt:
    1. 2283125Domain d5fjtb2: 5fjt B:126-367 [326426]
      Other proteins in same PDB: d5fjta1, d5fjtb1, d5fjtc1, d5fjtd1
      automated match to d1sjdb1
      complexed with 5cr, mg; mutant
    2. 2283174Domain d5fjta2: 5fjt A:126-367 [326475]
      Other proteins in same PDB: d5fjta1, d5fjtb1, d5fjtc1, d5fjtd1
      automated match to d1sjdb1
    3. 2283248Domain d5fjtc2: 5fjt C:126-367 [326549]
      Other proteins in same PDB: d5fjta1, d5fjtb1, d5fjtc1, d5fjtd1
      automated match to d1sjdb1
      complexed with 5cr, mg; mutant
    4. 2283294Domain d5fjtd2: 5fjt D:126-368 [326595]
      Other proteins in same PDB: d5fjta1, d5fjtb1, d5fjtc1, d5fjtd1
      automated match to d1sjdb1
      complexed with 5cr, mg; mutant
  5. Domain(s) for 5fju:
    1. 2282910Domain d5fjua2: 5fju A:126-368 [326211]
      Other proteins in same PDB: d5fjua1, d5fjub1, d5fjuc1, d5fjud1
      automated match to d1sjdb1
      complexed with 5cr, mg; mutant
    2. 2282916Domain d5fjub2: 5fju B:126-367 [326217]
      Other proteins in same PDB: d5fjua1, d5fjub1, d5fjuc1, d5fjud1
      automated match to d1sjdb1
      complexed with 5cr, mg; mutant
    3. 2282919Domain d5fjud2: 5fju D:126-367 [326220]
      Other proteins in same PDB: d5fjua1, d5fjub1, d5fjuc1, d5fjud1
      automated match to d1sjdb1
      complexed with 5cr, mg; mutant
    4. 2282954Domain d5fjuc2: 5fju C:126-367 [326255]
      Other proteins in same PDB: d5fjua1, d5fjub1, d5fjuc1, d5fjud1
      automated match to d1sjdb1
      complexed with 5cr, mg; mutant

More info for Species Amycolatopsis sp. [TaxId:37632] from c.1.11.2 automated matches

Timeline for Species Amycolatopsis sp. [TaxId:37632] from c.1.11.2 automated matches:

  • Species Amycolatopsis sp. [TaxId:37632] from c.1.11.2 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-11-16