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Lineage for d5lttm_ (5ltt M:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2201124Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2201125Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2201309Family d.153.1.4: Proteasome subunits [56251] (4 protein domains)
  6. 2203920Protein automated matches [190144] (11 species)
    not a true protein
  7. 2204191Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [189752] (155 PDB entries)
  8. 2282835Domain d5lttm_: 5ltt M: [326136]
    Other proteins in same PDB: d5ltta_, d5lttc_, d5lttd_, d5ltte_, d5lttg_, d5ltti_, d5lttj_, d5lttk_, d5lttl_, d5lttn_, d5ltto_, d5lttq_, d5lttr_, d5ltts_, d5lttu_, d5lttw_, d5lttx_, d5ltty_, d5lttz_
    automated match to d4qz7m_
    complexed with 39v, cl, mes, mg

Details for d5lttm_

PDB Entry: 5ltt (more details), 2.7 Å

PDB Description: yeast 20s proteasome with human beta5i (1-138; r57t)in complex with pr-924
PDB Compounds: (M:) Proteasome subunit beta type-7

SCOPe Domain Sequences for d5lttm_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5lttm_ d.153.1.4 (M:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
tqqpivtgtsvismkydngviiaadnlgsygsllrfngverlipvgdntvvgisgdisdm
qhierllkdlvtenaydnpladaeealepsyifeylatvmyqrrskmnplwnaiivagvq
sngdqflryvnllgvtyssptlatgfgahmanpllrkvvdresdipkttvqvaeeaivna
mrvlyyrdarssrnfslaiidkntgltfkknlqvenmkwdfakdikgygtqki

SCOPe Domain Coordinates for d5lttm_:

Click to download the PDB-style file with coordinates for d5lttm_.
(The format of our PDB-style files is described here.)

Timeline for d5lttm_:

  • d5lttm_ appears in periodic updates to SCOPe 2.06 starting on 2016-11-13