SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Burkholderia xenovorans [TaxId: 266265]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2137471Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 2137472Superfamily c.72.1: Ribokinase-like [53613] (6 families) (S)
    has extra strand located between strands 2 and 3
  5. 2137653Family c.72.1.5: PfkB-like kinase [82515] (3 protein domains)
    includes a variety of carbohydrate and pyrimidine kinases
  6. 2137682Protein automated matches [190479] (3 species)
    not a true protein
  7. 2282806Species Burkholderia xenovorans [TaxId:266265] [326107] (1 PDB entry)

PDB entry in Species: Burkholderia xenovorans [TaxId: 266265]:

More info for Species Burkholderia xenovorans [TaxId:266265] from c.72.1.5 automated matches

Timeline for Species Burkholderia xenovorans [TaxId:266265] from c.72.1.5 automated matches:

  • Species Burkholderia xenovorans [TaxId:266265] from c.72.1.5 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-11-13