SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5m1ia3 (5m1i A:-13-0)

  1. Root: SCOPe 2.06
  2. 2245868Class l: Artifacts [310555] (1 fold)
  3. 2245869Fold l.1: Tags [310573] (1 superfamily)
  4. 2245870Superfamily l.1.1: Tags [310607] (1 family) (S)
  5. 2245871Family l.1.1.1: Tags [310682] (2 protein domains)
  6. 2251949Protein N-terminal Tags [310894] (1 species)
  7. 2251950Species Synthetic [311501] (10528 PDB entries)
  8. 2282804Domain d5m1ia3: 5m1i A:-13-0 [326105]
    Other proteins in same PDB: d5m1ia1, d5m1ia2
    complexed with 7d8, edo, so4

Details for d5m1ia3

PDB Entry: 5m1i (more details), 1.55 Å

PDB Description: structure of gh36 alpha-galactosidase from thermotoga maritima in a covalent complex with a cyclopropyl carbasugar.
PDB Compounds: (A:) alpha-galactosidase

SCOPe Domain Sequences for d5m1ia3:

Sequence; same for both SEQRES and ATOM records: (download)

>d5m1ia3 l.1.1.1 (A:-13-0) N-terminal Tags {Synthetic}
hssglvprgshmas

SCOPe Domain Coordinates for d5m1ia3:

Click to download the PDB-style file with coordinates for d5m1ia3.
(The format of our PDB-style files is described here.)

Timeline for d5m1ia3:

  • d5m1ia3 appears in periodic updates to SCOPe 2.06 starting on 2016-11-13