SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2215948Fold d.300: Kinetochore globular domain-like [143025] (1 superfamily)
    core: alpha-beta(3)-alpha; variant: alpha-beta(4)-alpha(2)
  4. 2215949Superfamily d.300.1: Kinetochore globular domain [143026] (2 families) (S)
    swapped heterodimer with the N-terminal helices; Spc24-like subunits have the core fold, whereas Spc25-like subunits have a variant fold
  5. 2215950Family d.300.1.1: Spc25-like [143027] (2 protein domains)
    Pfam PF08234
  6. 2282764Protein automated matches [326065] (1 species)
    not a true protein

Species:

More info for Protein automated matches from d.300.1.1: Spc25-like

Timeline for Protein automated matches from d.300.1.1: Spc25-like:

  • Protein automated matches from d.300.1.1: Spc25-like appears in periodic updates to SCOPe 2.06 starting on 2016-11-13