SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Thermotoga maritima [TaxId: 2336]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2083644Family c.1.8.13: Glycosyl hydrolase family 31 catalytic domain [117372] (5 protein domains)
    Pfam PF01055
  6. 2083693Protein automated matches [310869] (2 species)
    not a true protein
  7. 2282707Species Thermotoga maritima [TaxId:2336] [326008] (4 PDB entries)

PDB entries in Species: Thermotoga maritima [TaxId: 2336]:

  1. Domain(s) for 5m0x:
  2. Domain(s) for 5m12:
  3. Domain(s) for 5m16:
  4. Domain(s) for 5m1i:

More info for Species Thermotoga maritima [TaxId:2336] from c.1.8.13 automated matches

Timeline for Species Thermotoga maritima [TaxId:2336] from c.1.8.13 automated matches:

  • Species Thermotoga maritima [TaxId:2336] from c.1.8.13 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-11-13