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Lineage for d5l5sm_ (5l5s M:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2201124Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2201125Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2201309Family d.153.1.4: Proteasome subunits [56251] (4 protein domains)
  6. 2203920Protein automated matches [190144] (11 species)
    not a true protein
  7. 2204191Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [189752] (157 PDB entries)
  8. 2282487Domain d5l5sm_: 5l5s M: [325788]
    Other proteins in same PDB: d5l5sa_, d5l5sc_, d5l5sd_, d5l5se_, d5l5sg_, d5l5si_, d5l5sj_, d5l5sk_, d5l5sl_, d5l5sn_, d5l5so_, d5l5sq_, d5l5sr_, d5l5ss_, d5l5su_, d5l5sw_, d5l5sx_, d5l5sy_, d5l5sz_
    automated match to d4qz7m_
    complexed with 39v, cl, mg

Details for d5l5sm_

PDB Entry: 5l5s (more details), 2.6 Å

PDB Description: yeast 20s proteasome with human beta5i (1-138; v31m) and human beta6 (97-111; 118-133) in complex with pr-924
PDB Compounds: (M:) Proteasome subunit beta type-7

SCOPe Domain Sequences for d5l5sm_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5l5sm_ d.153.1.4 (M:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}

SCOPe Domain Coordinates for d5l5sm_:

Click to download the PDB-style file with coordinates for d5l5sm_.
(The format of our PDB-style files is described here.)

Timeline for d5l5sm_:

  • d5l5sm_ appears in periodic updates to SCOPe 2.06 starting on 2016-11-12