SCOPe 2.08: Domain d5l63q1: 5l63 Q:1-234

Lineage for d5l63q1 (5l63 Q:1-234)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.0: automated matches [191393] (1 protein)
   not a true family

6. Protein automated matches [190509] (19 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [256123] (110 PDB entries)

8. Domain d5l63q1: 5l63 Q:1-234 [325650]
   Other proteins in same PDB: d5l63a_, d5l63b_, d5l63c2, d5l63f_, d5l63g_, d5l63h_, d5l63i_, d5l63j_, d5l63k_, d5l63l_, d5l63m_, d5l63n_, d5l63o_, d5l63p_, d5l63q2, d5l63t_, d5l63u_, d5l63v_, d5l63w_, d5l63x_, d5l63y_, d5l63z_
   automated match to d1iruf_
   complexed with 04c, cl, mes, mg

Details for d5l63q1

PDB Entry: 5l63, 2.7 Å

PDB Description: yeast 20s proteasome with human beta5c (1-138) and human beta6 (97- 111; 118-133) in complex with epoxyketone inhibitor 17

PDB Compounds: (Q:) Proteasome subunit alpha type-4

SCOPe Domain Sequences for d5l63q1:

Sequence; same for both SEQRES and ATOM records:

>d5l63q1 d.153.1.0 (Q:1-234) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
gydralsifspdghifqveyaleavkrgtcavgvkgkncvvlgcerrstlklqdtritps
kvskidshvvlsfsglnadsriliekarveaqshrltledpvtveyltryvagvqqrytq
sggvrpfgvstliagfdprddepklyqtepsgiysswsaqtigrnsktvrefleknydrk
eppatveecvkltvrsllevvqtgaknieitvvkpdsdivalsseeinqyvtqi

Timeline for d5l63q1:

• d5l63q1 first appeared in SCOPe 2.06, called d5l63q_
  
• d5l63q1 was called d5l63q_ in SCOPe 2.07