Lineage for d5l5pd_ (5l5p D:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2548740Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2548741Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2554828Family d.153.1.0: automated matches [191393] (1 protein)
    not a true family
  6. 2554829Protein automated matches [190509] (15 species)
    not a true protein
  7. 2554883Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [256123] (94 PDB entries)
  8. 2555109Domain d5l5pd_: 5l5p D: [325628]
    Other proteins in same PDB: d5l5pa_, d5l5pb_, d5l5pf_, d5l5pg_, d5l5ph_, d5l5pi_, d5l5pj_, d5l5pk_, d5l5pl_, d5l5pm_, d5l5pn_, d5l5po_, d5l5pp_, d5l5pt_, d5l5pu_, d5l5pv_, d5l5pw_, d5l5px_, d5l5py_, d5l5pz_
    automated match to d1iruf_
    complexed with 79l, cl, mes, mg

Details for d5l5pd_

PDB Entry: 5l5p (more details), 2.8 Å

PDB Description: yeast 20s proteasome with human beta5i (1-138) and human beta6 (97- 111; 118-133) in complex with epoxyketone inhibitor 17
PDB Compounds: (D:) Proteasome subunit alpha type-5

SCOPe Domain Sequences for d5l5pd_:

Sequence, based on SEQRES records: (download)

>d5l5pd_ d.153.1.0 (D:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}

Sequence, based on observed residues (ATOM records): (download)

>d5l5pd_ d.153.1.0 (D:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}

SCOPe Domain Coordinates for d5l5pd_:

Click to download the PDB-style file with coordinates for d5l5pd_.
(The format of our PDB-style files is described here.)

Timeline for d5l5pd_: