Lineage for d5l5iu_ (5l5i U:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2988339Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2988340Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2988529Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2988641Protein Proteasome alpha subunit (non-catalytic) [56255] (10 species)
    contains an extension to the common fold at the N-terminus
  7. 2990638Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [256264] (12 PDB entries)
  8. 2990709Domain d5l5iu_: 5l5i U: [325161]
    Other proteins in same PDB: d5l5ia_, d5l5ic2, d5l5ih_, d5l5ii_, d5l5ij_, d5l5im_, d5l5in_, d5l5io_, d5l5iq2, d5l5iv_, d5l5iw_, d5l5ix_
    automated match to d1irua_
    complexed with 38x, cl, mes, mg

Details for d5l5iu_

PDB Entry: 5l5i (more details), 2.9 Å

PDB Description: yeast 20s proteasome with human beta5i (1-138) and human beta6 (97- 111; 118-133) in complex with epoxyketone inhibitor 9
PDB Compounds: (U:) Proteasome subunit alpha type-1

SCOPe Domain Sequences for d5l5iu_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5l5iu_ d.153.1.4 (U:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
gydrhitifspegrlyqveyafkatnqtninslavrgkdctvvisqkkvpdklldpttvs
yifcisrtigmvvngpipdarnaalrakaeaaefrykygydmpcdvlakrmanlsqiytq
raymrplgviltfvsvdeelgpsiyktdpagyyvgykatatgpkqqeittnlenhfkksk
idhineeswekvvefaithmidalgtefskndlevgvatkdkfftlsaenieerlvaiae
q

SCOPe Domain Coordinates for d5l5iu_:

Click to download the PDB-style file with coordinates for d5l5iu_.
(The format of our PDB-style files is described here.)

Timeline for d5l5iu_: