SCOPe 2.06: Domain d5kncg_: 5knc G:

Lineage for d5kncg_ (5knc G:)

1. Root: SCOPe 2.06

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.4: Antiparallel coiled-coil [58086] (19 superfamilies)
   this is not a true fold; contains at least two very long antiparallel helices

4. Superfamily h.4.20: V-type ATPase central rotor subunit D [310580] (2 families)
   Role similar to F1 ATP synthase gamma (c.49.2), but do not appear to be homologous
   Has 2 antiparallel beta strands in addition to coiled coils; see PubMed 25971514

5. Family h.4.20.0: automated matches [310670] (1 protein)
   not a true family

6. Protein automated matches [310867] (2 species)
   not a true protein

7. Species Enterococcus hirae [TaxId:768486] [324701] (2 PDB entries)

8. Domain d5kncg_: 5knc G: [324760]
   Other proteins in same PDB: d5kncd1, d5kncd2, d5kncd3, d5knce1, d5knce2, d5knce3, d5kncf1, d5kncf2, d5kncf3
   automated match to d3a5cg_
   complexed with adp, gol, mg, so4

Details for d5kncg_

PDB Entry: 5knc, 3.02 Å

PDB Description: crystal structure of the 3 adp-bound v1 complex

PDB Compounds: (G:) V-type sodium ATPase subunit D

SCOPe Domain Sequences for d5kncg_:

Sequence, based on SEQRES records:

>d5kncg_ h.4.20.0 (G:) automated matches {Enterococcus hirae [TaxId: 768486]}
rlnvnptrmeltrlkkqlttatrghkllkdkqdelmrqfillirknnelrqaieketqta
mkdfvlakstveeafidellalpaenvsisvveknimsvkvplmnfqydetlnetpleyg
ylhsnaeldrsidgftqllpkllklaevektcqlmaeeiektrrrvnaleymtipqleet
iyyikmkleeneraevtrlikvknm

Sequence, based on observed residues (ATOM records):

>d5kncg_ h.4.20.0 (G:) automated matches {Enterococcus hirae [TaxId: 768486]}
rlnvnptrmeltrlkkqlttatrghkllkdkqdelmrqfillirknnelrqaieketqta
mkdfvlakstveeafidellalpaenvsisvveknimsvkvplmnfqydgylhsnaeldr
sidgftqllpkllklaevektcqlmaeeiektrrrvnaleymtipqleetiyyikmklee
neraevtrlikvknm

Timeline for d5kncg_:

• d5kncg_ is new in SCOPe 2.06-stable
  
• d5kncg_ appears in SCOPe 2.07
  
• d5kncg_ appears in the current release, SCOPe 2.08