Lineage for d5kndg_ (5knd G:)

  1. Root: SCOPe 2.07
  2. 2590057Class h: Coiled coil proteins [57942] (7 folds)
  3. 2592663Fold h.4: Antiparallel coiled-coil [58086] (19 superfamilies)
    this is not a true fold; contains at least two very long antiparallel helices
  4. 2592829Superfamily h.4.20: V-type ATPase central rotor subunit D [310580] (2 families) (S)
    Role similar to F1 ATP synthase gamma (c.49.2), but do not appear to be homologous
    Has 2 antiparallel beta strands in addition to coiled coils; see PubMed 25971514
  5. 2592837Family h.4.20.0: automated matches [310670] (1 protein)
    not a true family
  6. 2592838Protein automated matches [310867] (2 species)
    not a true protein
  7. 2592843Species Enterococcus hirae [TaxId:768486] [324701] (2 PDB entries)
  8. 2592844Domain d5kndg_: 5knd G: [324702]
    Other proteins in same PDB: d5kndd1, d5kndd2, d5kndd3, d5knde1, d5knde2, d5knde3, d5kndf1, d5kndf2, d5kndf3
    automated match to d3a5cg_
    complexed with b3p, gol, mg, po4

Details for d5kndg_

PDB Entry: 5knd (more details), 2.89 Å

PDB Description: crystal structure of the pi-bound v1 complex
PDB Compounds: (G:) V-type sodium ATPase subunit D

SCOPe Domain Sequences for d5kndg_:

Sequence, based on SEQRES records: (download)

>d5kndg_ h.4.20.0 (G:) automated matches {Enterococcus hirae [TaxId: 768486]}
nptrmeltrlkkqlttatrghkllkdkqdelmrqfillirknnelrqaieketqtamkdf
vlakstveeafidellalpaenvsisvveknimsvkvplmnfqydetlnetpleygylhs
naeldrsidgftqllpkllklaevektcqlmaeeiektrrrvnaleymtipqleetiyyi
kmkleeneraevtrlikvknm

Sequence, based on observed residues (ATOM records): (download)

>d5kndg_ h.4.20.0 (G:) automated matches {Enterococcus hirae [TaxId: 768486]}
nptrmeltrlkkqlttatrghkllkdkqdelmrqfillirknnelrqaieketqtamkdf
vlakstveeafideenvsisvveknimsvkvplmnfqnaeldrsidgftqllpkllklae
vektcqlmaeeiektrrrvnaleymtipqleetiyyikmkleeneraevtrlikvknm

SCOPe Domain Coordinates for d5kndg_:

Click to download the PDB-style file with coordinates for d5kndg_.
(The format of our PDB-style files is described here.)

Timeline for d5kndg_: