Lineage for d1a1va2 (1a1v A:326-624)

  1. Root: SCOP 1.61
  2. 172677Class c: Alpha and beta proteins (a/b) [51349] (117 folds)
  3. 179162Fold c.37: P-loop containing nucleotide triphosphate hydrolases [52539] (1 superfamily)
  4. 179163Superfamily c.37.1: P-loop containing nucleotide triphosphate hydrolases [52540] (18 families) (S)
  5. 180329Family c.37.1.14: RNA helicase [52724] (1 protein)
  6. 180330Protein HCV helicase domain [52725] (1 species)
  7. 180331Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] [52726] (5 PDB entries)
  8. 180333Domain d1a1va2: 1a1v A:326-624 [32468]

Details for d1a1va2

PDB Entry: 1a1v (more details), 2.2 Å

PDB Description: hepatitis c virus ns3 helicase domain complexed with single stranded sdna

SCOP Domain Sequences for d1a1va2:

Sequence, based on SEQRES records: (download)

>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates}
pgsvtvphpnieevalsttgeipfygkaiplevikggrhlifchskkkcdelaaklvalg
inavayyrgldvsviptsgdvvvvatdalmtgftgdfdsvidcntcvtqtvdfsldptft
ietttlpqdavsrtqrrgrtgrgkpgiyrfvapgerpsgmfdssvlcecydagcawyelt
paettvrlraymntpglpvcqdhlefwegvftglthidahflsqtkqsgenfpylvayqa
tvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevtlthpitkyimtcms

Sequence, based on observed residues (ATOM records): (download)

>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates}
pgsvtvphpnieevalsttgeipfygkaiplevikggrhlifchskkkcdelaaklvalg
inavayyrgldvsviptsgdvvvvatdalftgdfdsvidcntcvtqtvdfsldptftiet
ttlpqdavsrtqrrgrtgrgkpgiyrfvapgerpsgmfdssvlcecydagcawyeltpae
ttvrlraymntpglpvcqdhlefwegvftglthidahflsqtkqsgenfpylvayqatvc
araqapppswdqmwkclirlkptlhgptpllyrlgavqnevtlthpitkyimtcms

SCOP Domain Coordinates for d1a1va2:

Click to download the PDB-style file with coordinates for d1a1va2.
(The format of our PDB-style files is described here.)

Timeline for d1a1va2:

View in 3D
Domains from same chain:
(mouse over for more information)
d1a1va1