Lineage for d5loqb_ (5loq B:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2949708Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (24 families) (S)
    dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
  5. 2950158Family d.58.4.0: automated matches [191316] (1 protein)
    not a true family
  6. 2950159Protein automated matches [190081] (33 species)
    not a true protein
  7. 2950298Species Listeria monocytogenes [TaxId:1639] [324509] (1 PDB entry)
  8. 2950300Domain d5loqb_: 5loq B: [324513]
    automated match to d1vdha_
    complexed with fec, mpd, na

Details for d5loqb_

PDB Entry: 5loq (more details), 1.69 Å

PDB Description: structure of coproheme bound hemq from listeria monocytogenes
PDB Compounds: (B:) Putative heme-dependent peroxidase lmo2113

SCOPe Domain Sequences for d5loqb_:

Sequence, based on SEQRES records: (download)

>d5loqb_ d.58.4.0 (B:) automated matches {Listeria monocytogenes [TaxId: 1639]}
ktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiysilg
qkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsnylashmaggddpy
qnkgvrarlypalppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsyagkv
qqiiggsigfddyewgvtlfsddalefkrivtemrfdeasaryaefgsffignlllseql
sklfti

Sequence, based on observed residues (ATOM records): (download)

>d5loqb_ d.58.4.0 (B:) automated matches {Listeria monocytogenes [TaxId: 1639]}
ktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiysilg
qkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsyqnkgvrarlypal
ppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsyagkvqqiiggsigfddy
ewgvtlfsddalefkrivtemrfdeasaryaefgsffignlllseqlsklfti

SCOPe Domain Coordinates for d5loqb_:

Click to download the PDB-style file with coordinates for d5loqb_.
(The format of our PDB-style files is described here.)

Timeline for d5loqb_: