Lineage for Species: Arabidopsis thaliana [TaxId: 3702]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2079053Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families) (S)
  5. 2079793Family c.1.2.0: automated matches [191350] (1 protein)
    not a true family
  6. 2079794Protein automated matches [190292] (34 species)
    not a true protein
  7. 2280329Species Arabidopsis thaliana [TaxId:3702] [323630] (8 PDB entries)

PDB entries in Species: Arabidopsis thaliana [TaxId: 3702]:

  1. Domain(s) for 5k2z:
    1. 2280330Domain d5k2zb_: 5k2z B: [323631]
      automated match to d3fema_
      complexed with 6r3, cl, edo, so4
    2. 2280332Domain d5k2zc_: 5k2z C: [323633]
      automated match to d3fema_
      complexed with 6r3, cl, edo, so4
    3. 2280395Domain d5k2za_: 5k2z A: [323696]
      automated match to d3fema_
      complexed with 6r3, cl, edo, so4
    4. 2280420Domain d5k2zd_: 5k2z D: [323721]
      automated match to d3fema_
      complexed with 6r3, cl, edo, so4
  2. Domain(s) for 5k3v:
    1. 2280331Domain d5k3va_: 5k3v A: [323632]
      automated match to d3fema_
      complexed with cl, edo, so4
    2. 2280333Domain d5k3vb_: 5k3v B: [323634]
      automated match to d3fema_
      complexed with cl, edo, so4
    3. 2280343Domain d5k3vc_: 5k3v C: [323644]
      automated match to d3fema_
      complexed with cl, edo, so4
    4. 2280402Domain d5k3vd_: 5k3v D: [323703]
      automated match to d3fema_
      complexed with cl, edo, so4
  3. Domain(s) for 5lnr:
    1. 2285328Domain d5lnrc_: 5lnr C: [328629]
      automated match to d3fema_
      complexed with gol, plp
    2. 2285346Domain d5lnra_: 5lnr A: [328647]
      automated match to d3fema_
      complexed with gol, plp
    3. 2285349Domain d5lnrb_: 5lnr B: [328650]
      automated match to d3fema_
      complexed with gol, plp
    4. 2285398Domain d5lnrd_: 5lnr D: [328699]
      automated match to d3fema_
      complexed with gol, plp
  4. Domain(s) for 5lns:
    1. 2285271Domain d5lnsd_: 5lns D: [328572]
      automated match to d3fema_
      complexed with 5rp, po4
    2. 2285280Domain d5lnsb_: 5lns B: [328581]
      automated match to d3fema_
      complexed with 5rp, po4
    3. 2285291Domain d5lnsa_: 5lns A: [328592]
      automated match to d3fema_
      complexed with 5rp, po4
    4. 2285374Domain d5lnsc_: 5lns C: [328675]
      automated match to d3fema_
      complexed with 5rp, po4
  5. Domain(s) for 5lnt:
    1. 2285286Domain d5lntd_: 5lnt D: [328587]
      automated match to d3fema_
      complexed with kpr, po4
    2. 2285306Domain d5lntb_: 5lnt B: [328607]
      automated match to d3fema_
      complexed with kpr, po4
    3. 2285342Domain d5lntc_: 5lnt C: [328643]
      automated match to d3fema_
      complexed with kpr, po4
    4. 2285362Domain d5lnta_: 5lnt A: [328663]
      automated match to d3fema_
      complexed with kpr, po4
  6. Domain(s) for 5lnu:
    1. 2285303Domain d5lnud_: 5lnu D: [328604]
      automated match to d3fema_
      complexed with kik, po4, so4
    2. 2285326Domain d5lnua_: 5lnu A: [328627]
      automated match to d3fema_
      complexed with kik, po4, so4
    3. 2285364Domain d5lnuc_: 5lnu C: [328665]
      automated match to d3fema_
      complexed with kik, po4, so4
    4. 2285385Domain d5lnub_: 5lnu B: [328686]
      automated match to d3fema_
      complexed with kik, po4, so4
  7. Domain(s) for 5lnv:
    1. 2285293Domain d5lnvb_: 5lnv B: [328594]
      automated match to d3fema_
      complexed with kik, po4, so4
    2. 2285296Domain d5lnva_: 5lnv A: [328597]
      automated match to d3fema_
      complexed with kik, po4, so4
    3. 2285327Domain d5lnvd_: 5lnv D: [328628]
      automated match to d3fema_
      complexed with kik, po4, so4
    4. 2285367Domain d5lnvc_: 5lnv C: [328668]
      automated match to d3fema_
      complexed with kik, po4, so4
  8. Domain(s) for 5lnw:
    1. 2285289Domain d5lnwc_: 5lnw C: [328590]
      automated match to d3fema_
      complexed with gol, hg3, k8p, rp5
    2. 2285304Domain d5lnwb_: 5lnw B: [328605]
      automated match to d3fema_
      complexed with gol, hg3, k8p, rp5
    3. 2285375Domain d5lnwd_: 5lnw D: [328676]
      automated match to d3fema_
      complexed with gol, hg3, k8p, rp5
    4. 2285386Domain d5lnwa_: 5lnw A: [328687]
      automated match to d3fema_
      complexed with gol, hg3, k8p, rp5

More info for Species Arabidopsis thaliana [TaxId:3702] from c.1.2.0 automated matches

Timeline for Species Arabidopsis thaliana [TaxId:3702] from c.1.2.0 automated matches:

  • Species Arabidopsis thaliana [TaxId:3702] from c.1.2.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2016-10-07