Lineage for Species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

  1. Root: SCOPe 2.07
  2. 2568173Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2570412Fold e.6: Acyl-CoA dehydrogenase NM domain-like [56644] (1 superfamily)
    2 domains: (1) all-alpha: 5 helices; (2) contains an open beta-sheet barrel: n*=5, S*=8; complex topology
  4. 2570413Superfamily e.6.1: Acyl-CoA dehydrogenase NM domain-like [56645] (3 families) (S)
    flavoprotein: binds FAD; constituent families differ in the numbers of C-terminal domains (four-helical bundles)
  5. 2570558Family e.6.1.0: automated matches [227203] (1 protein)
    not a true family
  6. 2570559Protein automated matches [226934] (28 species)
    not a true protein
  7. 2570684Species Nematode (Caenorhabditis elegans) [TaxId:6239] [321813] (4 PDB entries)

PDB entries in Species: Nematode (Caenorhabditis elegans) [TaxId: 6239]:

  1. Domain(s) for 5k3g:
    1. 2570703Domain d5k3ga1: 5k3g A:2-279 [344302]
      Other proteins in same PDB: d5k3ga2, d5k3ga3, d5k3gb2, d5k3gb3, d5k3gc2, d5k3gc3, d5k3gd2, d5k3gd3
      automated match to d5k3ic1
    2. 2570704Domain d5k3gb1: 5k3g B:2-280 [344305]
      Other proteins in same PDB: d5k3ga2, d5k3ga3, d5k3gb2, d5k3gb3, d5k3gc2, d5k3gc3, d5k3gd2, d5k3gd3
      automated match to d5k3ic1
    3. 2570705Domain d5k3gc1: 5k3g C:2-281 [344308]
      Other proteins in same PDB: d5k3ga2, d5k3ga3, d5k3gb2, d5k3gb3, d5k3gc2, d5k3gc3, d5k3gd2, d5k3gd3
      automated match to d5k3ic1
    4. 2570706Domain d5k3gd1: 5k3g D:2-280 [321814]
      Other proteins in same PDB: d5k3ga2, d5k3ga3, d5k3gb2, d5k3gb3, d5k3gc2, d5k3gc3, d5k3gd2, d5k3gd3
      automated match to d2ddha3
  2. Domain(s) for 5k3h:
    1. 2570685Domain d5k3ha1: 5k3h A:2-281 [345726]
      Other proteins in same PDB: d5k3ha2, d5k3ha3, d5k3hb2, d5k3hb3, d5k3hc2, d5k3hc3, d5k3hd2, d5k3hd3, d5k3he2, d5k3he3, d5k3hf2, d5k3hf3, d5k3hg2, d5k3hg3, d5k3hh2, d5k3hh3
      automated match to d5k3ic1
    2. 2570686Domain d5k3hb1: 5k3h B:2-281 [345729]
      Other proteins in same PDB: d5k3ha2, d5k3ha3, d5k3hb2, d5k3hb3, d5k3hc2, d5k3hc3, d5k3hd2, d5k3hd3, d5k3he2, d5k3he3, d5k3hf2, d5k3hf3, d5k3hg2, d5k3hg3, d5k3hh2, d5k3hh3
      automated match to d5k3ic1
    3. 2570687Domain d5k3hc1: 5k3h C:2-281 [345732]
      Other proteins in same PDB: d5k3ha2, d5k3ha3, d5k3hb2, d5k3hb3, d5k3hc2, d5k3hc3, d5k3hd2, d5k3hd3, d5k3he2, d5k3he3, d5k3hf2, d5k3hf3, d5k3hg2, d5k3hg3, d5k3hh2, d5k3hh3
      automated match to d5k3ic1
    4. 2570688Domain d5k3hd1: 5k3h D:2-281 [345735]
      Other proteins in same PDB: d5k3ha2, d5k3ha3, d5k3hb2, d5k3hb3, d5k3hc2, d5k3hc3, d5k3hd2, d5k3hd3, d5k3he2, d5k3he3, d5k3hf2, d5k3hf3, d5k3hg2, d5k3hg3, d5k3hh2, d5k3hh3
      automated match to d5k3ic1
    5. 2570689Domain d5k3he1: 5k3h E:2-281 [345738]
      Other proteins in same PDB: d5k3ha2, d5k3ha3, d5k3hb2, d5k3hb3, d5k3hc2, d5k3hc3, d5k3hd2, d5k3hd3, d5k3he2, d5k3he3, d5k3hf2, d5k3hf3, d5k3hg2, d5k3hg3, d5k3hh2, d5k3hh3
      automated match to d5k3ic1
    6. 2570690Domain d5k3hf1: 5k3h F:2-281 [345741]
      Other proteins in same PDB: d5k3ha2, d5k3ha3, d5k3hb2, d5k3hb3, d5k3hc2, d5k3hc3, d5k3hd2, d5k3hd3, d5k3he2, d5k3he3, d5k3hf2, d5k3hf3, d5k3hg2, d5k3hg3, d5k3hh2, d5k3hh3
      automated match to d5k3ic1
    7. 2570691Domain d5k3hg1: 5k3h G:2-281 [345744]
      Other proteins in same PDB: d5k3ha2, d5k3ha3, d5k3hb2, d5k3hb3, d5k3hc2, d5k3hc3, d5k3hd2, d5k3hd3, d5k3he2, d5k3he3, d5k3hf2, d5k3hf3, d5k3hg2, d5k3hg3, d5k3hh2, d5k3hh3
      automated match to d5k3ic1
    8. 2570692Domain d5k3hh1: 5k3h H:2-281 [345747]
      Other proteins in same PDB: d5k3ha2, d5k3ha3, d5k3hb2, d5k3hb3, d5k3hc2, d5k3hc3, d5k3hd2, d5k3hd3, d5k3he2, d5k3he3, d5k3hf2, d5k3hf3, d5k3hg2, d5k3hg3, d5k3hh2, d5k3hh3
      automated match to d5k3ic1
  3. Domain(s) for 5k3i:
    1. 2570693Domain d5k3ia1: 5k3i A:2-282 [344311]
      Other proteins in same PDB: d5k3ia2, d5k3ia3, d5k3ib2, d5k3ib3, d5k3ic2, d5k3ic3, d5k3id2, d5k3id3, d5k3ie2, d5k3ie3, d5k3if2, d5k3if3, d5k3ig2, d5k3ig3, d5k3ih2, d5k3ih3
      automated match to d5k3ic1
      complexed with atp, fad, mg
    2. 2570694Domain d5k3ib1: 5k3i B:2-282 [344314]
      Other proteins in same PDB: d5k3ia2, d5k3ia3, d5k3ib2, d5k3ib3, d5k3ic2, d5k3ic3, d5k3id2, d5k3id3, d5k3ie2, d5k3ie3, d5k3if2, d5k3if3, d5k3ig2, d5k3ig3, d5k3ih2, d5k3ih3
      automated match to d5k3ic1
      complexed with atp, fad, mg
    3. 2570695Domain d5k3ic1: 5k3i C:2-282 [322306]
      Other proteins in same PDB: d5k3ia2, d5k3ia3, d5k3ib2, d5k3ib3, d5k3ic2, d5k3ic3, d5k3id2, d5k3id3, d5k3ie2, d5k3ie3, d5k3if2, d5k3if3, d5k3ig2, d5k3ig3, d5k3ih2, d5k3ih3
      automated match to d2ddha3
      complexed with atp, fad, mg
    4. 2570696Domain d5k3id1: 5k3i D:2-282 [322208]
      Other proteins in same PDB: d5k3ia2, d5k3ia3, d5k3ib2, d5k3ib3, d5k3ic2, d5k3ic3, d5k3id2, d5k3id3, d5k3ie2, d5k3ie3, d5k3if2, d5k3if3, d5k3ig2, d5k3ig3, d5k3ih2, d5k3ih3
      automated match to d2ddha3
      complexed with atp, fad, mg
    5. 2570697Domain d5k3ie1: 5k3i E:2-282 [344317]
      Other proteins in same PDB: d5k3ia2, d5k3ia3, d5k3ib2, d5k3ib3, d5k3ic2, d5k3ic3, d5k3id2, d5k3id3, d5k3ie2, d5k3ie3, d5k3if2, d5k3if3, d5k3ig2, d5k3ig3, d5k3ih2, d5k3ih3
      automated match to d5k3ic1
      complexed with atp, fad, mg
    6. 2570698Domain d5k3if1: 5k3i F:2-278 [322437]
      Other proteins in same PDB: d5k3ia2, d5k3ia3, d5k3ib2, d5k3ib3, d5k3ic2, d5k3ic3, d5k3id2, d5k3id3, d5k3ie2, d5k3ie3, d5k3if2, d5k3if3, d5k3ig2, d5k3ig3, d5k3ih2, d5k3ih3
      automated match to d2ddha3
      complexed with atp, fad, mg
    7. 2570699Domain d5k3ig1: 5k3i G:2-281 [322314]
      Other proteins in same PDB: d5k3ia2, d5k3ia3, d5k3ib2, d5k3ib3, d5k3ic2, d5k3ic3, d5k3id2, d5k3id3, d5k3ie2, d5k3ie3, d5k3if2, d5k3if3, d5k3ig2, d5k3ig3, d5k3ih2, d5k3ih3
      automated match to d2ddha3
      complexed with atp, fad, mg
    8. 2570700Domain d5k3ih1: 5k3i H:2-282 [344320]
      Other proteins in same PDB: d5k3ia2, d5k3ia3, d5k3ib2, d5k3ib3, d5k3ic2, d5k3ic3, d5k3id2, d5k3id3, d5k3ie2, d5k3ie3, d5k3if2, d5k3if3, d5k3ig2, d5k3ig3, d5k3ih2, d5k3ih3
      automated match to d5k3ic1
      complexed with atp, fad, mg
  4. Domain(s) for 5k3j:
    1. 2570701Domain d5k3ja1: 5k3j A:3-278 [322216]
      Other proteins in same PDB: d5k3ja2, d5k3ja3, d5k3ja4, d5k3jb2, d5k3jb3, d5k3jb4
      automated match to d2ddha3
      complexed with 6qa, atp, fad, mg
    2. 2570702Domain d5k3jb1: 5k3j B:2-278 [322443]
      Other proteins in same PDB: d5k3ja2, d5k3ja3, d5k3ja4, d5k3jb2, d5k3jb3, d5k3jb4
      automated match to d2ddha3
      complexed with 6qa, atp, fad, mg

More info for Species Nematode (Caenorhabditis elegans) [TaxId:6239] from e.6.1.0 automated matches

Timeline for Species Nematode (Caenorhabditis elegans) [TaxId:6239] from e.6.1.0 automated matches: