Lineage for d5lf1a_ (5lf1 A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2988339Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2988340Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2988529Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2988641Protein Proteasome alpha subunit (non-catalytic) [56255] (10 species)
    contains an extension to the common fold at the N-terminus
  7. 2990749Species Human (Homo sapiens) [TaxId:9606] [311422] (15 PDB entries)
  8. 2990758Domain d5lf1a_: 5lf1 A: [321548]
    Other proteins in same PDB: d5lf1d_, d5lf1e_, d5lf1f_, d5lf1g_, d5lf1h_, d5lf1i_, d5lf1j_, d5lf1k_, d5lf1l_, d5lf1m_, d5lf1n_, d5lf1r_, d5lf1s_, d5lf1t_, d5lf1u_, d5lf1v_, d5lf1w_, d5lf1x_, d5lf1y_, d5lf1z_
    automated match to d1irub_
    complexed with 1pe, 6vc, cl, k, mg

Details for d5lf1a_

PDB Entry: 5lf1 (more details), 2 Å

PDB Description: human 20s proteasome complex with dihydroeponemycin at 2.0 angstrom
PDB Compounds: (A:) Proteasome subunit alpha type-2

SCOPe Domain Sequences for d5lf1a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5lf1a_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Human (Homo sapiens) [TaxId: 9606]}
rgysfslttfspsgklvqieyalaavaggapsvgikaangvvlatekkqksilydersvh
kvepitkhiglvysgmgpdyrvlvhrarklaqqyylvyqepiptaqlvqrvasvmqeytq
sggvrpfgvsllicgwnegrpylfqsdpsgayfawkatamgknyvngktflekrynedle
ledaihtailtlkesfegqmtednievgicneagfrrltptevkdylaai

SCOPe Domain Coordinates for d5lf1a_:

Click to download the PDB-style file with coordinates for d5lf1a_.
(The format of our PDB-style files is described here.)

Timeline for d5lf1a_: