SCOPe 2.08: Domain d5kdob_: 5kdo B:

Lineage for d5kdob_ (5kdo B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.69: 7-bladed beta-propeller [50964] (15 superfamilies)
   consists of seven 4-stranded beta-sheet motifs; meander

4. Superfamily b.69.4: WD40 repeat-like [50978] (4 families)
   also contains 8-bladed propellers

5. Family b.69.4.1: WD40-repeat [50979] (17 proteins)
   this is a repeat family; one repeat unit is 1tyq C:201-243 found in domain

6. Protein beta1-subunit of the signal-transducing G protein heterotrimer [50980] (1 species)

7. Species Cow (Bos taurus) [TaxId:9913] [50981] (73 PDB entries)

8. Domain d5kdob_: 5kdo B: [320483]
   Other proteins in same PDB: d5kdog_
   automated match to d1tbga_
   complexed with gdp
   has additional insertions and/or extensions that are not grouped together

Details for d5kdob_

PDB Entry: 5kdo, 1.9 Å

PDB Description: heterotrimeric complex of the 4 alanine insertion variant of the gi alpha1 subunit and the gbeta1-ggamma1

PDB Compounds: (B:) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

SCOPe Domain Sequences for d5kdob_:

Sequence, based on SEQRES records:

>d5kdob_ b.69.4.1 (B:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
seldqlrqeaeqlknqirdarkacadatlsqitnnidpvgriqmrtrrtlrghlakiyam
hwgtdsrllvsasqdgkliiwdsyttnkvhaiplrsswvmtcayapsgnyvacggldnic
siynlktregnvrvsrelaghtgylsccrflddnqivtssgdttcalwdietgqqtttft
ghtgdvmslslapdtrlfvsgacdasaklwdvregmcrqtftghesdinaicffpngnaf
atgsddatcrlfdlradqelmtyshdniicgitsvsfsksgrlllagyddfncnvwdalk
adragvlaghdnrvsclgvtddgmavatgswdsflkiwn

Sequence, based on observed residues (ATOM records):

>d5kdob_ b.69.4.1 (B:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
seldqlrqeaeqlknqirdarkacadatlsqitnnidpvgriqmrtrrtlrghlakiyam
hwgtdsrllvsasqdgkliiwdsyttnkvhaiplrsswvmtcayapsgnyvacggldnic
siynlktvrvsrelaghtgylsccrflddnqivtssgdttcalwdietgqqtttftghtg
dvmslslapdtrlfvsgacdasaklwdvregmcrqtftghesdinaicffpngnafatgs
ddatcrlfdlradqelmtyshdniicgitsvsfsksgrlllagyddfncnvwdalkadra
gvlaghdnrvsclgvtddgmavatgswdsflkiwn

Timeline for d5kdob_:

• d5kdob_ first appeared in SCOPe 2.06
  
• d5kdob_ appears in SCOPe 2.07