SCOP 1.71: Domain d1aky_1: 1aky 3-130,169-220

Lineage for d1aky_1 (1aky 3-130,169-220)

1. Root: SCOP 1.71

2. Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (23 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.1: Nucleotide and nucleoside kinases [52541] (18 proteins)
   parallel beta-sheet of 5 strands, order 23145

6. Protein Adenylate kinase [52554] (14 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [52559] (4 PDB entries)
   contains a rudiment "zinc-finger" subdomain, residue 131-168

8. Domain d1aky_1: 1aky 3-130,169-220 [31896]
   Other proteins in same PDB: d1aky_2
   complexed with ap5, imd

Details for d1aky_1

PDB Entry: 1aky, 1.63 Å

PDB Description: high-resolution structures of adenylate kinase from yeast ligated with inhibitor ap5a, showing the pathway of phosphoryl transfer

SCOP Domain Sequences for d1aky_1:

Sequence; same for both SEQRES and ATOM records:

>d1aky_1 c.37.1.1 (3-130,169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae)}
esirmvligppgagkgtqapnlqerfhaahlatgdmlrsqiakgtqlgleakkimdqggl
vsddimvnmikdeltnnpackngfildgfprtipqaekldqmlkeqgtplekaielkvdd
ellvaritXnadalkkrlaayhaqtepivdfykktgiwagvdasqppatvwadilnklgk
n

Timeline for d1aky_1:

• d1aky_1 first appeared (with stable ids) in SCOP 1.55
  
• d1aky_1 appears in SCOP 1.69
  
• d1aky_1 is called d1akya1 in SCOP 1.73
  
• d1aky_1 appears in the current release, SCOPe 2.08, called d1akya1