Lineage for d1zpda2 (1zpd A:2-187)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 694610Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 694611Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (8 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 694612Family c.36.1.5: Pyruvate oxidase and decarboxylase Pyr module [88724] (8 proteins)
    the N-terminal, Pyr module is separated from the C-terminal, PP module by an alpha/beta domain of Rossmann-like topology
  6. 694697Protein Pyruvate decarboxylase [88725] (3 species)
  7. 694706Species Zymomonas mobilis [TaxId:542] [88728] (1 PDB entry)
  8. 694707Domain d1zpda2: 1zpd A:2-187 [31785]
    Other proteins in same PDB: d1zpda1, d1zpda3, d1zpdb1, d1zpdb3, d1zpde1, d1zpde3, d1zpdf1, d1zpdf3

Details for d1zpda2

PDB Entry: 1zpd (more details), 1.86 Å

PDB Description: pyruvate decarboxylase from zymomonas mobilis
PDB Compounds: (A:) pyruvate decarboxylase

SCOP Domain Sequences for d1zpda2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}
sytvgtylaerlvqiglkhhfavagdynlvlldnlllnknmeqvyccnelncgfsaegya
rakgaaaavvtysvgalsafdaiggayaenlpvilisgapnnndhaaghvlhhalgktdy
hyqlemaknitaaaeaiytpeeapakidhviktalrekkpvyleiacniasmpcaapgpa
salfnd

SCOP Domain Coordinates for d1zpda2:

Click to download the PDB-style file with coordinates for d1zpda2.
(The format of our PDB-style files is described here.)

Timeline for d1zpda2: