SCOPe 2.06: Domain d5byva1: 5byv A:4-278

Lineage for d5byva1 (5byv A:4-278)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.95: Thiolase-like [53900] (1 superfamily)
   consists of two similar domains related by pseudo dyad; duplication
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32451; strand 5 is antiparallel to the rest

4. Superfamily c.95.1: Thiolase-like [53901] (3 families)

5. Family c.95.1.0: automated matches [196908] (1 protein)
   not a true family

6. Protein automated matches [196909] (60 species)
   not a true protein

7. Species Mycobacterium smegmatis [TaxId:246196] [317395] (4 PDB entries)

8. Domain d5byva1: 5byv A:4-278 [317627]
   automated match to d4wysa1

Details for d5byva1

PDB Entry: 5byv, 2.16 Å

PDB Description: crystal structure of msm-13, a putative t1-like thiolase from mycobacterium smegmatis

PDB Compounds: (A:) Beta-ketothiolase

SCOPe Domain Sequences for d5byva1:

Sequence, based on SEQRES records:

>d5byva1 c.95.1.0 (A:4-278) automated matches {Mycobacterium smegmatis [TaxId: 246196]}
rdavicepvrtpigryggmfrsltavdlgvtalkgllertgiaadqvedvilghcypnse
apaigrvvaldaglpitvpgmqvdrrcgsglqaviqaclqvrsgdhdlvvaggaesmsnv
afystdmrwggartgvqihdglargrttaggkfhpvpggmletaenlrreyhisrteqde
lavrshqravaaqsegvlaeeiipvpvrtrdgeetisvdehpradttvealaklkpvllk
qdpeatvtagnssgqndaasmcivttpekaaelgl

Sequence, based on observed residues (ATOM records):

>d5byva1 c.95.1.0 (A:4-278) automated matches {Mycobacterium smegmatis [TaxId: 246196]}
rdavicepvrtpigryggmfrsltavdlgvtalkgllertgiaadqvedvilghcypnse
apaigrvvaldaglpitvpgmqvdrrcgsglqaviqaclqvrsgdhdlvvaggaesmsnv
afystdmrwggartgvqihdglargrttaggkfhpvpggmletaenlrreyhisrteqde
lavrshqravaaqsegvlaeeiipvpvretisvdehpradttvealaklkpvllkqdpea
tvtagnssgqndaasmcivttpekaaelgl

Timeline for d5byva1:

• d5byva1 is new in SCOPe 2.06-stable
  
• d5byva1 appears in SCOPe 2.07
  
• d5byva1 appears in the current release, SCOPe 2.08