SCOPe 2.08: Domain d5hx4b_: 5hx4 B:

Lineage for d5hx4b_ (5hx4 B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
   core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest

4. Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families)
   contains extra C-terminal strand 5, order 21345

5. Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains [310632] (5 proteins)
   strand 5 is parallel to strand 4
   Pfam PF08210; Pfam PF05240

6. Protein APOBEC3F [310758] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [311013] (5 PDB entries)

8. Domain d5hx4b_: 5hx4 B: [317512]
   automated match to d2kema_

Details for d5hx4b_

PDB Entry: 5hx4, 1.92 Å

PDB Description: zinc-free apobec3f catalytic domain crystal structure

PDB Compounds: (B:) DNA dC->dU-editing enzyme APOBEC-3F

SCOPe Domain Sequences for d5hx4b_:

Sequence, based on SEQRES records:

>d5hx4b_ c.97.1.6 (B:) APOBEC3F {Human (Homo sapiens) [TaxId: 9606]}
npmeamdphifyfhfknlrkaygrneswlcftmevvkhhspvswkrgvfrnqvdpetgrh
aercflswfaddilspntnyevtwytswspcpecagevaeflarhsnvnltiktarlyyf
ddtdyqeglrslsqegasveimgykdfkycwenfvynddepfkpwdgldynfldldsklq
eile

Sequence, based on observed residues (ATOM records):

>d5hx4b_ c.97.1.6 (B:) APOBEC3F {Human (Homo sapiens) [TaxId: 9606]}
npmeamdphifyfhfknlneswlcftmevvkhhspvswkrgvfrnercflswfaddilsp
ntnyevtwytswspcpecagevaeflarhsnvnltiktarlyyfddtdyqeglrslsqeg
asveimgykdfkycwenfvynddepfkpwdgldynfldldsklqeile

Timeline for d5hx4b_:

• d5hx4b_ first appeared in SCOPe 2.06
  
• d5hx4b_ appears in SCOPe 2.07