Lineage for d5i4db2 (5i4d B:256-356)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2177211Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2179689Superfamily d.15.6: Superantigen toxins, C-terminal domain [54334] (2 families) (S)
  5. 2179910Family d.15.6.0: automated matches [227139] (1 protein)
    not a true family
  6. 2179911Protein automated matches [226841] (5 species)
    not a true protein
  7. 2179936Species Staphylococcus aureus [TaxId:426430] [267924] (2 PDB entries)
  8. 2179937Domain d5i4db2: 5i4d B:256-356 [315270]
    Other proteins in same PDB: d5i4da1, d5i4db1
    automated match to d4dxga2
    complexed with fuc, gal, nag, ndg, pg4, pge, sia

Details for d5i4db2

PDB Entry: 5i4d (more details), 1.75 Å

PDB Description: 1.75 angstrom crystal structure of superantigen-like protein, exotoxin from staphylococcus aureus, in complex with sialyl-lewisx.
PDB Compounds: (B:) Superantigen-like protein

SCOPe Domain Sequences for d5i4db2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5i4db2 d.15.6.0 (B:256-356) automated matches {Staphylococcus aureus [TaxId: 426430]}
kvnhkvelsitkkdnqgmisrdvseymitkeeislkeldfklrkqliekhnlygnmgsgt
ivikmknggkytfelhkklqehrmadvidgtnidnievnik

SCOPe Domain Coordinates for d5i4db2:

Click to download the PDB-style file with coordinates for d5i4db2.
(The format of our PDB-style files is described here.)

Timeline for d5i4db2:

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Domains from same chain:
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d5i4db1