SCOPe 2.06: Domain d5fzoa1: 5fzo A:2157-2498

Lineage for d5fzoa1 (5fzo A:2157-2498)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families)
   Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold

5. Family b.82.2.0: automated matches [191672] (1 protein)
   not a true family

6. Protein automated matches [191281] (13 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [255708] (2 PDB entries)

8. Domain d5fzoa1: 5fzo A:2157-2498 [314590]
   Other proteins in same PDB: d5fzoa2, d5fzob2
   automated match to d4c8da_
   complexed with cl, edo, mn

Details for d5fzoa1

PDB Entry: 5fzo, 1.84 Å

PDB Description: crystal structure of the catalytic domain of human jmjd1c

PDB Compounds: (A:) probable jmjc domain-containing histone demethylation prot ein 2c

SCOPe Domain Sequences for d5fzoa1:

Sequence, based on SEQRES records:

>d5fzoa1 b.82.2.0 (A:2157-2498) automated matches {Human (Homo sapiens) [TaxId: 9606]}
iphswicekhilwlkdyknssnwklfkecwkqgqpavvsgvhkkmnislwkaesisldfg
dhqadllnckdsiisnanvkefwdgfeevskrqknksgetvvlklkdwpsgedfktmmpa
ryedllkslplpeycnpegkfnlashlpgffvrpdlgprlcsaygvvaakdhdigttnlh
ievsdvvnilvyvgiakgngilskagilkkfeeedlddilrkrlkdsseipgalwhiyag
kdvdkireflqkiskeqglevlpehdpirdqswyvnkklrqrlleeygvrtctliqflgd
aivlpagalhqvqnfhsciqvtedfvspehlvesfhltqelr

Sequence, based on observed residues (ATOM records):

>d5fzoa1 b.82.2.0 (A:2157-2498) automated matches {Human (Homo sapiens) [TaxId: 9606]}
iphswicekhilwlkdyknssnwklfkecwkqgqpavvsgvhkkmnislwkaesisldfg
dhqadllnckdsiisnanvkefwdgfeevskrqketvvlklkdwpsgedfktmmparyed
llkslplpeycnpegkfnlashlpgffvrpdlgprlcsaygvvaakdhdigttnlhievs
dvvnilvyvgiakgngilskagilkkfeeedlddilrkrlkdsseipgalwhiyagkdvd
kireflqkiskeqglevlpehdpirdqswyvnkklrqrlleeygvrtctliqflgdaivl
pagalhqvqnfhsciqvtedfvspehlvesfhltqelr

Timeline for d5fzoa1:

• d5fzoa1 is new in SCOPe 2.06-stable
  
• d5fzoa1 appears in SCOPe 2.07
  
• d5fzoa1 appears in the current release, SCOPe 2.08