SCOPe 2.06: Domain d5f7kd1: 5f7k D:3-114

Lineage for d5f7kd1 (5f7k D:3-114)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)

6. Protein automated matches [190119] (22 species)
   not a true protein

7. Species Llama (Lama glama) [TaxId:9844] [187485] (138 PDB entries)

8. Domain d5f7kd1: 5f7k D:3-114 [314084]
   Other proteins in same PDB: d5f7kc2, d5f7kd2
   automated match to d4ldeb_
   complexed with edo, na, po4

Details for d5f7kd1

PDB Entry: 5f7k, 2.17 Å

PDB Description: blood group antigen binding adhesin baba of helicobacter pylori strain 17875 in complex with nanobody nb-er19

PDB Compounds: (D:) Nanobody Nb-ER19

SCOPe Domain Sequences for d5f7kd1:

Sequence; same for both SEQRES and ATOM records:

>d5f7kd1 b.1.1.1 (D:3-114) automated matches {Llama (Lama glama) [TaxId: 9844]}
vqlqesggglvqpggslrlscaasgsifsgnvmgwyrqapgklrewvaaitpqgvpnyad
svkgrftisrdnaknmlylqmsslkpedtalyycnrlpnyrswgqgtqvtvs

Timeline for d5f7kd1:

• d5f7kd1 is new in SCOPe 2.06-stable
  
• d5f7kd1 appears in SCOPe 2.07
  
• d5f7kd1 appears in the current release, SCOPe 2.08