Lineage for d5dyga3 (5dyg A:201-460)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2870969Family c.37.1.20: Extended AAA-ATPase domain [81269] (43 proteins)
    fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain
  6. 2871178Protein Membrane fusion ATPase VCP/p97 [64038] (2 species)
  7. 2871179Species Human (Homo sapiens) [TaxId:9606] [313486] (5 PDB entries)
  8. 2871180Domain d5dyga3: 5dyg A:201-460 [313487]
    Other proteins in same PDB: d5dyga1, d5dyga2
    automated match to d1e32a2
    complexed with adp; mutant

Details for d5dyga3

PDB Entry: 5dyg (more details), 2.2 Å

PDB Description: structure of p97 n-d1 l198w mutant in complex with adp
PDB Compounds: (A:) Transitional endoplasmic reticulum ATPase

SCOPe Domain Sequences for d5dyga3:

Sequence; same for both SEQRES and ATOM records: (download)

>d5dyga3 c.37.1.20 (A:201-460) Membrane fusion ATPase VCP/p97 {Human (Homo sapiens) [TaxId: 9606]}
vgyddiggcrkqlaqikemvelplrhpalfkaigvkpprgillygppgtgktliaravan
etgaffflingpeimsklagesesnlrkafeeaeknapaiifideldaiapkrekthgev
errivsqlltlmdglkqrahvivmaatnrpnsidpalrrfgrfdrevdigipdatgrlei
lqihtknmkladdvdleqvanethghvgadlaalcseaalqairkkmdlidledetidae
vmnslavtmddfrwalsqsn

SCOPe Domain Coordinates for d5dyga3:

Click to download the PDB-style file with coordinates for d5dyga3.
(The format of our PDB-style files is described here.)

Timeline for d5dyga3: