Lineage for d5c7mc_ (5c7m C:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (9 species)
  7. 2501491Species Human (Homo sapiens) [TaxId:9606] [54239] (296 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2501848Domain d5c7mc_: 5c7m C: [312857]
    Other proteins in same PDB: d5c7ma_
    automated match to d3rula_

Details for d5c7mc_

PDB Entry: 5c7m (more details), 3.03 Å

PDB Description: crystal structure of e3 ligase itch with a ub variant
PDB Compounds: (C:) Polyubiquitin-C

SCOPe Domain Sequences for d5c7mc_:

Sequence, based on SEQRES records: (download)

>d5c7mc_ d.15.1.1 (C:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mhilvktlrgktitlevepsdtienvkakiqdkegippdqqrllfggnkledgrtlsdyn
iqkesnlylllr

Sequence, based on observed residues (ATOM records): (download)

>d5c7mc_ d.15.1.1 (C:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mhilvktlrgktitlevepsdtienvkakiqdkegippdqqrllfggnkledgrtlsdyn
qkesnlylllr

SCOPe Domain Coordinates for d5c7mc_:

Click to download the PDB-style file with coordinates for d5c7mc_.
(The format of our PDB-style files is described here.)

Timeline for d5c7mc_: