Lineage for d5c7ma_ (5c7m A:)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2224083Fold d.148: Hect, E3 ligase catalytic domain [56203] (1 superfamily)
    consists of two alpha+beta domains; the N-terminal domain is array of helices and beta-hairpins; the C-terminal domain is an a/b sandwich with one left-handed beta-alpha(n)-beta unit; conformational flexibility of domain orientation
  4. 2224084Superfamily d.148.1: Hect, E3 ligase catalytic domain [56204] (2 families) (S)
    automatically mapped to Pfam PF00632
  5. 2224100Family d.148.1.0: automated matches [227207] (1 protein)
    not a true family
  6. 2224101Protein automated matches [226939] (2 species)
    not a true protein
  7. 2224102Species Human (Homo sapiens) [TaxId:9606] [225255] (16 PDB entries)
  8. 2224123Domain d5c7ma_: 5c7m A: [312779]
    Other proteins in same PDB: d5c7mb_, d5c7mc_
    automated match to d2xbba_

Details for d5c7ma_

PDB Entry: 5c7m (more details), 3.03 Å

PDB Description: crystal structure of e3 ligase itch with a ub variant
PDB Compounds: (A:) E3 ubiquitin-protein ligase Itchy homolog

SCOPe Domain Sequences for d5c7ma_:

Sequence, based on SEQRES records: (download)

>d5c7ma_ d.148.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
rdfkakvqyfrfwcqqlampqhikitvtrktlfedsfqqimsfspqdlrrrlwvifpgee
gldyggvarewffllshevsnpmyclfeyagkdnyclqinpasyinpdhlkyfrfigrfi
amalfhgkfidtgfslpfykrilnkpvglkdlesidpefynsliwvkennieecdlemyf
svdkeilgeikshdlkpnggnilvteenkeeyirmvaewrlsrgveeqtqaffegfneil
pqqylqyfdakelevllcgmqeidlndwqrhaiyrryartskqimwfwqfvkeidnekrm
rllqfvtgtcrlpvggfadlmgsngpqkfciekvgkenwlprshtcfnrldlppyksyeq
lkekllfaieeteg

Sequence, based on observed residues (ATOM records): (download)

>d5c7ma_ d.148.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
rdfkakvqyfrfwcqqlampqhikitvtrktlfedsfqqimsfspqdlrrrlwvifpgee
gldyggvarewffllshevsnpmyclfeyagkclqinpasyinpdhlkyfrfigrfiama
lfhgkfidtgfslpfykrilnkpvglkdlesidpefynsliwvkennieecdlemyfsvd
kelgeikshdlkpnggnilvteenkeeyirmvaewrlsrgveeqtqaffegfneilpqqy
lqyfdakelevllcgmqeidlndwqrhaiyrryartskqimwfwqfvkeidnekrmrllq
fvtgtcrlpvggfadlmgsngpqkfciekvgkenwlprshtcfnrldlppyksyeqlkek
llfaieeteg

SCOPe Domain Coordinates for d5c7ma_:

Click to download the PDB-style file with coordinates for d5c7ma_.
(The format of our PDB-style files is described here.)

Timeline for d5c7ma_: