Lineage for Species: Human betacoronavirus 2c EMC/2012 [TaxId: 1235996]
- Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds) 
Fold d.3: Cysteine proteinases [54000] (1 superfamily)
consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-AsnSuperfamily d.3.1: Cysteine proteinases [54001] (24 families) 
the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
Family d.3.1.23: Papain-like viral protease catalytic domain [310648] (2 proteins)
C-terminal part of Pfam PF08715
Protein Papain-like protease PLpro, catalytic domain [310795] (4 species) Species Human betacoronavirus 2c EMC/2012 [TaxId:1235996] [311055] (7 PDB entries)
PDB entries in Species: Human betacoronavirus 2c EMC/2012 [TaxId: 1235996]:
- Domain(s) for 4p16:
Domain d4p16a2: 4p16 A:62-319 [307968]
Other proteins in same PDB: d4p16a1
complexed with zn
- Domain(s) for 4pt5:
Domain d4pt5a2: 4pt5 A:64-324 [308009]
Other proteins in same PDB: d4pt5a1
automated match to d4p16a2
complexed with zn
- Domain(s) for 4rna:
Domain d4rnaa2: 4rna A:62-322 [309477]
Other proteins in same PDB: d4rnaa1
automated match to d4p16a2
complexed with po4, zn
- Domain(s) for 5v69:
Domain d5v69a2: 5v69 A:1543-1802 [334684]
Other proteins in same PDB: d5v69a1, d5v69b_
automated match to d4pt5a2
complexed with cl, na, pgo, zn
- Domain(s) for 5v6a:
Domain d5v6aa2: 5v6a A:1543-1800 [334340]
Other proteins in same PDB: d5v6aa1, d5v6ab_
automated match to d4pt5a2
complexed with cl, flc, zn
- Domain(s) for 5w8t:
Domain d5w8ta2: 5w8t A:62-320 [339684]
Other proteins in same PDB: d5w8ta1, d5w8tb_, d5w8tc1, d5w8td_
automated match to d4pt5a2
complexed with aye, mpd, zn
Domain d5w8tc2: 5w8t C:62-320 [339686]
Other proteins in same PDB: d5w8ta1, d5w8tb_, d5w8tc1, d5w8td_
automated match to d4pt5a2
complexed with aye, mpd, zn
- Domain(s) for 5w8u:
Domain d5w8ua2: 5w8u A:62-320 [339689]
Other proteins in same PDB: d5w8ua1, d5w8ub1, d5w8ub2, d5w8uc1, d5w8ud1, d5w8ud2
automated match to d4pt5a2
complexed with aye, mpd, zn
Domain d5w8uc2: 5w8u C:62-320 [339682]
Other proteins in same PDB: d5w8ua1, d5w8ub1, d5w8ub2, d5w8uc1, d5w8ud1, d5w8ud2
automated match to d4pt5a2
complexed with aye, mpd, zn
More info for Species Human betacoronavirus 2c EMC/2012 [TaxId:1235996] from d.3.1.23 Papain-like protease PLpro, catalytic domain
Timeline for Species Human betacoronavirus 2c EMC/2012 [TaxId:1235996] from d.3.1.23 Papain-like protease PLpro, catalytic domain:
- Species Human betacoronavirus 2c EMC/2012 [TaxId:1235996] from d.3.1.23 Papain-like protease PLpro, catalytic domain first appeared in SCOPe 2.06
- Species Human betacoronavirus 2c EMC/2012 [TaxId:1235996] from d.3.1.23 Papain-like protease PLpro, catalytic domain appears in SCOPe 2.07