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Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2033719Superfamily b.1.33: Membrane antigen precursor-like [310605] (2 families) (S)
    Pfam PF10634
  5. 2033737Family b.1.33.0: automated matches [310673] (1 protein)
    not a true family
  6. 2033738Protein automated matches [310872] (2 species)
    not a true protein

Species:

  1. 2033739Campylobacter jejuni [TaxId:354242] [311313] (8 PDB entries)
    1. Domains for 3lzl:
      1. 2033740Domain d3lzla_: 3lzl A: [305905]
        automated match to d2o6cb_
        complexed with cu, so4
      2. 2033741Domain d3lzlb_: 3lzl B: [305906]
        automated match to d2o6cb_
        complexed with cu, so4
    2. Domains for 3lzn:
      1. 2033744Domain d3lzna_: 3lzn A: [305907]
        automated match to d2o6cb_
        complexed with so4, zn
      2. 2033745Domain d3lznb_: 3lzn B: [305908]
        automated match to d2o6cb_
        complexed with so4, zn
    3. Domains for 3lzo:
      1. 2033746Domain d3lzoa1: 3lzo A:2-159 [305909]
        Other proteins in same PDB: d3lzoa2, d3lzob2
        automated match to d2o6cb_
        complexed with cu, so4
      2. 2033747Domain d3lzob1: 3lzo B:2-159 [305911]
        Other proteins in same PDB: d3lzoa2, d3lzob2
        automated match to d2o6cb_
        complexed with cu, so4
    4. Domains for 3lzp:
      1. 2033748Domain d3lzpa1: 3lzp A:2-159 [305913]
        Other proteins in same PDB: d3lzpa2
        automated match to d2o6cb_
        complexed with cu, so4
      2. 2033749Domain d3lzpb_: 3lzp B: [305915]
        Other proteins in same PDB: d3lzpa2
        automated match to d2o6cb_
        complexed with cu, so4
    5. Domains for 3lzq:
      1. 2033742Domain d3lzqa_: 3lzq A: [305916]
        Other proteins in same PDB: d3lzqb2
        automated match to d2o6cb_
        complexed with cu, mn, so4
      2. 2033743Domain d3lzqb1: 3lzq B:2-159 [305917]
        Other proteins in same PDB: d3lzqb2
        automated match to d2o6cb_
        complexed with cu, mn, so4
    6. Domains for 3lzr:
      1. 2033750Domain d3lzra_: 3lzr A: [305919]
        automated match to d2o6cb_
        complexed with cu, mn, so4
      2. 2033751Domain d3lzrb_: 3lzr B: [305920]
        automated match to d2o6cb_
        complexed with cu, mn, so4
    7. Domains for 5i0v:
      1. 2286125Domain d5i0va1: 5i0v A:2-159 [329426]
        Other proteins in same PDB: d5i0va2
        automated match to d3lznb_
        complexed with cl, cu, fe
      2. 2286128Domain d5i0vb_: 5i0v B: [329429]
        Other proteins in same PDB: d5i0va2
        automated match to d3lznb_
        complexed with cl, cu, fe
    8. Domains for 5i0w:
      1. 2286131Domain d5i0wa1: 5i0w A:2-159 [329432]
        Other proteins in same PDB: d5i0wa2
        automated match to d3lznb_
        complexed with cl, cu1, fe2, tam
      2. 2286171Domain d5i0wb_: 5i0w B: [329472]
        Other proteins in same PDB: d5i0wa2
        automated match to d3lznb_
        complexed with cl, cu1, fe2, tam
  2. 2286133Escherichia coli [TaxId:340197] [329434] (2 PDB entries)
    1. Domains for 5i0x:
      1. 2286134Domain d5i0xb1: 5i0x B:3-153 [329435]
        Other proteins in same PDB: d5i0xa2, d5i0xb2
        automated match to d3lznb_
        complexed with cu
      2. 2286169Domain d5i0xa1: 5i0x A:3-153 [329470]
        Other proteins in same PDB: d5i0xa2, d5i0xb2
        automated match to d3lznb_
        complexed with cu
    2. Domains for 5i0y:
      1. 2286136Domain d5i0ya_: 5i0y A: [329437]
        Other proteins in same PDB: d5i0yb2
        automated match to d3lznb_
        complexed with cu
      2. 2286155Domain d5i0yb1: 5i0y B:3-153 [329456]
        Other proteins in same PDB: d5i0yb2
        automated match to d3lznb_
        complexed with cu

More info for Protein automated matches from b.1.33.0: automated matches

Timeline for Protein automated matches from b.1.33.0: automated matches:

  • Protein automated matches from b.1.33.0: automated matches is new in SCOPe 2.06-stable