Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2363547Superfamily b.1.33: Membrane antigen precursor-like [310605] (2 families) (S)
    Pfam PF10634
  5. 2363565Family b.1.33.0: automated matches [310673] (1 protein)
    not a true family
  6. 2363566Protein automated matches [310872] (2 species)
    not a true protein

Species:

  1. 2363567Campylobacter jejuni [TaxId:354242] [311313] (8 PDB entries)
    1. Domains for 3lzl:
      1. 2363568Domain d3lzla_: 3lzl A: [305905]
        automated match to d2o6cb_
        complexed with cu, so4
      2. 2363569Domain d3lzlb_: 3lzl B: [305906]
        automated match to d2o6cb_
        complexed with cu, so4
    2. Domains for 3lzn:
      1. 2363572Domain d3lzna_: 3lzn A: [305907]
        automated match to d2o6cb_
        complexed with so4, zn
      2. 2363573Domain d3lznb_: 3lzn B: [305908]
        automated match to d2o6cb_
        complexed with so4, zn
    3. Domains for 3lzo:
      1. 2363574Domain d3lzoa1: 3lzo A:2-159 [305909]
        Other proteins in same PDB: d3lzoa2, d3lzob2
        automated match to d2o6cb_
        complexed with cu, so4
      2. 2363575Domain d3lzob1: 3lzo B:2-159 [305911]
        Other proteins in same PDB: d3lzoa2, d3lzob2
        automated match to d2o6cb_
        complexed with cu, so4
    4. Domains for 3lzp:
      1. 2363576Domain d3lzpa1: 3lzp A:2-159 [305913]
        Other proteins in same PDB: d3lzpa2
        automated match to d2o6cb_
        complexed with cu, so4
      2. 2363577Domain d3lzpb_: 3lzp B: [305915]
        Other proteins in same PDB: d3lzpa2
        automated match to d2o6cb_
        complexed with cu, so4
    5. Domains for 3lzq:
      1. 2363570Domain d3lzqa_: 3lzq A: [305916]
        Other proteins in same PDB: d3lzqb2
        automated match to d2o6cb_
        complexed with cu, mn, so4
      2. 2363571Domain d3lzqb1: 3lzq B:2-159 [305917]
        Other proteins in same PDB: d3lzqb2
        automated match to d2o6cb_
        complexed with cu, mn, so4
    6. Domains for 3lzr:
      1. 2363582Domain d3lzra_: 3lzr A: [305919]
        automated match to d2o6cb_
        complexed with cu, mn, so4
      2. 2363583Domain d3lzrb_: 3lzr B: [305920]
        automated match to d2o6cb_
        complexed with cu, mn, so4
    7. Domains for 5i0v:
      1. 2363580Domain d5i0va1: 5i0v A:2-159 [329426]
        Other proteins in same PDB: d5i0va2
        automated match to d3lznb_
        complexed with cl, cu, fe
      2. 2363581Domain d5i0vb_: 5i0v B: [329429]
        Other proteins in same PDB: d5i0va2
        automated match to d3lznb_
        complexed with cl, cu, fe
    8. Domains for 5i0w:
      1. 2363578Domain d5i0wa1: 5i0w A:2-159 [329432]
        Other proteins in same PDB: d5i0wa2
        automated match to d3lznb_
        complexed with cl, cu1, fe2, tam
      2. 2363579Domain d5i0wb_: 5i0w B: [329472]
        Other proteins in same PDB: d5i0wa2
        automated match to d3lznb_
        complexed with cl, cu1, fe2, tam
  2. 2363584Escherichia coli [TaxId:340197] [329434] (4 PDB entries)
    1. Domains for 3nrp:
      1. 2363585Domain d3nrpa1: 3nrp A:3-153 [344962]
        Other proteins in same PDB: d3nrpa2, d3nrpb2, d3nrpc2, d3nrpd2
        automated match to d5i0ya_
      2. 2363586Domain d3nrpb1: 3nrp B:3-153 [344964]
        Other proteins in same PDB: d3nrpa2, d3nrpb2, d3nrpc2, d3nrpd2
        automated match to d5i0ya_
      3. 2363587Domain d3nrpc1: 3nrp C:3-152 [344966]
        Other proteins in same PDB: d3nrpa2, d3nrpb2, d3nrpc2, d3nrpd2
        automated match to d5i0ya_
      4. 2363588Domain d3nrpd1: 3nrp D:3-152 [344968]
        Other proteins in same PDB: d3nrpa2, d3nrpb2, d3nrpc2, d3nrpd2
        automated match to d5i0ya_
    2. Domains for 3nrq:
      1. 2363589Domain d3nrqa_: 3nrq A: [344970]
        automated match to d5i0ya_
        complexed with cu
      2. 2363590Domain d3nrqb_: 3nrq B: [344971]
        automated match to d5i0ya_
        complexed with cu
    3. Domains for 5i0x:
      1. 2363593Domain d5i0xa1: 5i0x A:3-153 [329470]
        Other proteins in same PDB: d5i0xa2, d5i0xb2
        automated match to d3lznb_
        complexed with cu
      2. 2363594Domain d5i0xb1: 5i0x B:3-153 [329435]
        Other proteins in same PDB: d5i0xa2, d5i0xb2
        automated match to d3lznb_
        complexed with cu
    4. Domains for 5i0y:
      1. 2363591Domain d5i0ya_: 5i0y A: [329437]
        Other proteins in same PDB: d5i0yb2
        automated match to d3lznb_
        complexed with cu
      2. 2363592Domain d5i0yb1: 5i0y B:3-153 [329456]
        Other proteins in same PDB: d5i0yb2
        automated match to d3lznb_
        complexed with cu

More info for Protein automated matches from b.1.33.0: automated matches

Timeline for Protein automated matches from b.1.33.0: automated matches: