SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)
Family c.1.8.13: Glycosyl hydrolase family 31 catalytic domain [117372] (5 proteins)
Pfam PF01055
Protein automated matches [310869] (2 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [311308] (7 PDB entries)
1. Domain for 3l4t:
  - Domain d3l4ta2: 3l4t A:270-649 [305754]
    Other proteins in same PDB: d3l4ta1, d3l4ta3, d3l4ta4, d3l4ta5
    automated match to d2qlya2
    complexed with bj1, nag
2. Domain for 3l4u:
  - Domain d3l4ua2: 3l4u A:270-649 [305759]
    Other proteins in same PDB: d3l4ua1, d3l4ua3, d3l4ua4, d3l4ua5
    automated match to d2qlya2
    complexed with dsk, nag, so4
3. Domain for 3l4v:
  - Domain d3l4va2: 3l4v A:270-649 [305764]
    Other proteins in same PDB: d3l4va1, d3l4va3, d3l4va4, d3l4va5
    automated match to d2qlya2
    complexed with ktl, nag
4. Domain for 3l4w:
  - Domain d3l4wa2: 3l4w A:270-649 [305769]
    Other proteins in same PDB: d3l4wa1, d3l4wa3, d3l4wa4, d3l4wa5
    automated match to d2qlya2
    complexed with gol, mig, nag
5. Domain for 3l4x:
  - Domain d3l4xa2: 3l4x A:270-649 [305774]
    Other proteins in same PDB: d3l4xa1, d3l4xa3, d3l4xa4, d3l4xa5
    automated match to d2qlya2
    complexed with gol, nag, nr3
6. Domain for 3l4y:
  - Domain d3l4ya2: 3l4y A:270-649 [305779]
    Other proteins in same PDB: d3l4ya1, d3l4ya3, d3l4ya4, d3l4ya5
    automated match to d2qlya2
    complexed with gol, nag, nr4, so4
7. Domain for 3l4z:
  - Domain d3l4za2: 3l4z A:270-649 [305784]
    Other proteins in same PDB: d3l4za1, d3l4za3, d3l4za4, d3l4za5
    automated match to d2qlya2
    complexed with gol, nag, ssd
Thermotoga maritima [TaxId:2336] [326008] (4 PDB entries)
1. Domain for 5m0x:
  - Domain d5m0xa2: 5m0x A:178-525 [326049]
    Other proteins in same PDB: d5m0xa1, d5m0xa3
    automated match to d1zy9a2
    complexed with mg, so4
2. Domain for 5m12:
  - Domain d5m12a2: 5m12 A:178-525 [326009]
    Other proteins in same PDB: d5m12a1, d5m12a3
    automated match to d1zy9a2
    complexed with 7d0, mg, so4
3. Domain for 5m16:
  - Domain d5m16a2: 5m16 A:178-525 [326015]
    Other proteins in same PDB: d5m16a1, d5m16a3
    automated match to d1zy9a2
    complexed with 7d2, mg, so4
4. Domain for 5m1i:
  - Domain d5m1ia2: 5m1i A:178-525 [326104]
    Other proteins in same PDB: d5m1ia1, d5m1ia3
    automated match to d1zy9a2
    complexed with 7d8, edo, so4

More info for Protein automated matches from c.1.8.13: Glycosyl hydrolase family 31 catalytic domain

Timeline for Protein automated matches from c.1.8.13: Glycosyl hydrolase family 31 catalytic domain:

Protein automated matches from c.1.8.13: Glycosyl hydrolase family 31 catalytic domain is new in SCOPe 2.06-stable
Protein automated matches from c.1.8.13: Glycosyl hydrolase family 31 catalytic domain appears in SCOPe 2.07
Protein automated matches from c.1.8.13: Glycosyl hydrolase family 31 catalytic domain appears in the current release, SCOPe 2.08